RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CHMP1BQ7LBR1 199 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 OR6V1Q8N148 313 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TEX19Q8NA77 164 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 SMAP2Q8WU79 429 aaPredicted RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 RNFT2Q96EX2 444 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TEAD3Q99594 435 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 TUBA1CQ9BQE3 449 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 COPS4Q9BT78 406 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 NUAK2Q9H093 628 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 DUSP21Q9H596 190 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
SRP54-208ENST00000555557 RPL36Q9Y3U8 105 aaKnown RBP9.09□□□□□ -0.95
SRP54-208ENST00000555557 CHD6Q8TD26 2715 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 SVILO95425 2214 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 LOC102725191A0A1B0GVB3 256 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 A0A1B0GVG6 124 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 CCDC182A6NF36 153 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ZNF716A6NP11 495 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 AQP7O14520 342 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 VAMP5O95183 116 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 GPANK1O95872 356 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 CRYABP02511 175 aaKnown RBP9.08□□□□□ -0.96
SRP54-208ENST00000555557 SPI1P17947 270 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 SLC2A5P22732 501 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 GSTT1P30711 240 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 HTR1FP30939 366 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 SLC15A1P46059 708 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 MTNR1AP48039 350 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 CSNK2BP67870 215 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 FMODQ06828 376 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 RASGEF1BQ0VAM2 473 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ST3GAL4Q11206 333 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ETFDHQ16134 617 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 PRR30Q53SZ7 412 aaPredicted RBP9.08□□□□□ -0.96
SRP54-208ENST00000555557 OTPQ5XKR4 325 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 GTF2IRD2BQ6EKJ0 949 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 FAM180AQ6UWF9 173 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 FGD2Q7Z6J4 655 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 GTF2IRD2Q86UP8 949 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ZIC4Q8N9L1 334 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 OR4F15Q8NGB8 312 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 KISS1RQ969F8 398 aaPredicted RBP9.08□□□□□ -0.96
SRP54-208ENST00000555557 ZMYND19Q96E35 227 aaPredicted RBP9.08□□□□□ -0.96
SRP54-208ENST00000555557 FOXN4Q96NZ1 517 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 PRRG4Q9BZD6 226 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 NMNAT2Q9BZQ4 307 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 FKBP14Q9NWM8 211 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 TAS2R16Q9NYV7 291 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ING1Q9UK53 422 aaPredicted RBP9.08□□□□□ -0.96
SRP54-208ENST00000555557 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRP54-208ENST00000555557 CLEC4AQ9UMR7 237 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 ZFYVE26Q68DK2 2539 aa9.08□□□□□ -0.96
SRP54-208ENST00000555557 IGKV1D-43A0A0B4J1Z2 117 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SLC16A7O60669 478 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 CYTIPO60759 359 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SYNGR4O95473 234 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 TGM6O95932 706 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RENP00797 406 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 MRPL3P09001 348 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 CTLA4P16410 223 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 LY6DQ14210 128 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 POU4F3Q15319 338 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 INAQ16352 499 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ABLIM2Q6H8Q1 611 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 GID4Q8IVV7 300 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 OR51G2Q8NGK0 314 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 OR6K6Q8NGW6 343 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RFKQ969G6 155 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SARAFQ96BY9 339 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SNRNP40Q96DI7 357 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 LGALS12Q96DT0 336 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 GPR137Q96N19 417 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 PRDM14Q9GZV8 571 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SLC25A18Q9H1K4 315 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 MCTS1Q9ULC4 181 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 COMMD3-BMI1R4GMX3 469 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 A6NIZ1 184 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SNTNA6NMZ2 147 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ZNF726A6NNF4 738 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RGS10O43665 173 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 MT-ND2P03891 347 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 CDK1P06493 297 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ATP6V1E1P36543 226 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 MAP2K4P45985 399 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SELENOPP49908 381 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 GABARAPL2P60520 117 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RAP1BP61224 184 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RAP1AP62834 184 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 LGALS3BPQ08380 585 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 FOXB2Q5VYV0 432 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ZNF324BQ6AW86 544 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms