RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SYT14Q8NB59 555 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 OR52H1Q8NGJ2 320 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 OR10T2Q8NGX3 314 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 SGK3Q96BR1 496 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 ZNF382Q96SR6 550 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 ZNF717Q9BY31 904 aaPredicted RBP1.36□□□□□ -2.19
SNX6-204ENST00000555541 KRT23Q9C075 422 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 MRPL47Q9HD33 250 aaKnown RBP1.36□□□□□ -2.19
SNX6-204ENST00000555541 ISYNA1Q9NPH2 558 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 SIGLEC9Q9Y336 463 aa1.36□□□□□ -2.19
SNX6-204ENST00000555541 IGLV3-22A0A075B6J6 115 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 IGKV2-24A0A0C4DH68 120 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 XPO1O14980 1071 aaKnown RBP1.35□□□□□ -2.19
SNX6-204ENST00000555541 MAPK13O15264 365 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 RP2O75695 350 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 GABARAPO95166 117 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 BCHEP06276 602 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 GAP43P17677 238 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 CSNK1A1P48729 337 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 SUB1P53999 127 aaKnown RBP eCLIP1.35□□□□□ -2.19
SNX6-204ENST00000555541 ZNF616Q08AN1 781 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 KLRB1Q12918 225 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 PLD1Q13393 1074 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 GINS1Q14691 196 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 PON3Q15166 354 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 GALNT17Q6IS24 598 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 FAM133AQ8N9E0 248 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 SDR42E1Q8WUS8 393 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 RTN4IP1Q8WWV3 396 aaPredicted RBP1.35□□□□□ -2.19
SNX6-204ENST00000555541 UBE2E3Q969T4 207 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 TM4SF18Q96CE8 201 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 SECISBP2Q96T21 854 aaKnown RBP1.35□□□□□ -2.19
SNX6-204ENST00000555541 TIMM29Q9BSF4 260 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 OSBPL10Q9BXB5 764 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 C1orf21Q9H246 121 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 ZNF391Q9UJN7 358 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 RPH3ALQ9UNE2 315 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 PSG8Q9UQ74 426 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 POLDIP2Q9Y2S7 368 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 MEMO1Q9Y316 297 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 TIMM10BQ9Y5J6 103 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 ADGRL1O94910 1474 aa1.35□□□□□ -2.19
SNX6-204ENST00000555541 CENPJQ9HC77 1338 aaPredicted RBP1.35□□□□□ -2.19
SNX6-204ENST00000555541 OR5B21A6NL26 309 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 CHST1O43916 411 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 PRPSAP2O60256 369 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 OR56A5P0C7T3 313 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 C1GALT1C1LP0DN25 315 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 CCDC130P13994 396 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 TCN1P20061 433 aaPredicted RBP1.34□□□□□ -2.19
SNX6-204ENST00000555541 CA8P35219 290 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 OPRK1P41145 380 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 SLC11A1P49279 550 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 ARG2P78540 354 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 SELPLGQ14242 412 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 TMEM225Q6GV28 225 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 UNQ9165/PRO28630Q6UXU0 137 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 CCDC80Q76M96 950 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 ABHD3Q8WU67 409 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 MAIP1Q8WWC4 291 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 CCDC47Q96A33 483 aaKnown RBP1.34□□□□□ -2.19
SNX6-204ENST00000555541 CLCC1Q96S66 551 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 MRPL37Q9BZE1 423 aaKnown RBP1.34□□□□□ -2.19
SNX6-204ENST00000555541 SYNDIG1Q9H7V2 258 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 UBE2ZQ9H832 354 aaPredicted RBP1.34□□□□□ -2.19
SNX6-204ENST00000555541 ZNF230Q9UIE0 474 aaPredicted RBP1.34□□□□□ -2.19
SNX6-204ENST00000555541 LAMP5Q9UJQ1 280 aa1.34□□□□□ -2.19
SNX6-204ENST00000555541 ADAMTS13Q76LX8 1427 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 CCER2I3L3R5 266 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 LGALS9O00182 355 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 PRKAB2O43741 272 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 DIRAS1O95057 198 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 AK1P00568 194 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 LGALS3P17931 250 aaKnown RBP1.33□□□□□ -2.2
SNX6-204ENST00000555541 HMGB2P26583 209 aaKnown RBP1.33□□□□□ -2.2
SNX6-204ENST00000555541 LAP3P28838 519 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 GNA11P29992 359 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 ATP6V1E1P36543 226 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 RPL13AP40429 203 aaKnown RBP1.33□□□□□ -2.2
SNX6-204ENST00000555541 SCRN3Q0VDG4 424 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 GANABQ14697 944 aaKnown RBP1.33□□□□□ -2.2
SNX6-204ENST00000555541 C10orf120Q5SQS8 335 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 ABHD13Q7L211 337 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 ZNF619Q8N2I2 560 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 NOXO1Q8NFA2 376 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 OR5D13Q8NGL4 314 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 PYROXD1Q8WU10 500 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 CTNNBL1Q8WYA6 563 aaPredicted RBP1.33□□□□□ -2.2
SNX6-204ENST00000555541 COL21A1Q96P44 957 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 TGM7Q96PF1 710 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 LRRN3Q9H3W5 708 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 DBNDD1Q9H9R9 158 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 ADAP2Q9NPF8 381 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 KCNIP3Q9Y2W7 256 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 MSH6P52701 1360 aa1.33□□□□□ -2.2
SNX6-204ENST00000555541 A8MUI8 341 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 MED7O43513 233 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 HLA-DPB1P04440 258 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 RORAP35398 523 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 PRRX1P54821 245 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms