RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 DNAJC8O75937 253 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-214ENST00000554928 GOSR1O95249 250 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ATE1O95260 518 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 CELA3BP08861 270 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ITGA2P17301 1181 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 IST1P53990 364 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 CTXN1P60606 82 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ERVK-25P63136 954 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 FMODQ06828 376 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-214ENST00000554928 MTX3Q5HYI7 312 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 OR7E24Q6IFN5 339 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 KLHL24Q6TFL4 600 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 B3GLCTQ6Y288 498 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 OAFQ86UD1 273 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 P2RY8Q86VZ1 359 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 OR9Q2Q8NGE9 314 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 OR4C15Q8NGM1 316 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 FGFBP3Q8TAT2 258 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 NMD3Q96D46 503 aaKnown RBP10.79□□□□□ -0.68
SYNE2-214ENST00000554928 MUCL1Q96DR8 90 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-214ENST00000554928 BOD1Q96IK1 185 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 LRR1Q96L50 414 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ALPK1Q96QP1 1244 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF224Q9NZL3 707 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 SLC7A8Q9UHI5 535 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 POMPQ9Y244 141 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ADAM18Q9Y3Q7 739 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 LYVE1Q9Y5Y7 322 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 ROS1P08922 2347 aa10.79□□□□□ -0.68
SYNE2-214ENST00000554928 OTOGQ6ZRI0 2925 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 A0A1W2PRG6 482 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF99A8MXY4 864 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 SHISA9B4DS77 424 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 H7C1C5 153 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ABCD4O14678 606 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 SLC2A10O95528 541 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 IGHMP01871 453 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 QDPRP09417 244 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 PATE4P0C8F1 98 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 B4GALT1P15291 398 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ACADSP16219 412 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 CD53P19397 219 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 SLC9A3P48764 834 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 LCN6P62502 163 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 TGFBR3Q03167 851 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 TRAP1Q12931 704 aaKnown RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ZBED5Q49AG3 693 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ANKRD16Q6P6B7 361 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ABHD12BQ7Z5M8 362 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 C17orf78Q8N4C9 275 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 NOXO1Q8NFA2 376 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF519Q8TB69 540 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 CANT1Q8WVQ1 401 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 AKAP1Q92667 903 aaKnown RBP eCLIP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 RSRC1Q96IZ7 334 aaKnown RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ADAD1Q96M93 576 aaKnown RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
SYNE2-214ENST00000554928 KATNB1Q9BVA0 655 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 TXNIPQ9H3M7 391 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 MAGIXQ9H6Y5 334 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 SIGLEC7Q9Y286 467 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 AMDHD2Q9Y303 409 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 CADP27708 2225 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 CCDC168Q8NDH2 2452 aa10.78□□□□□ -0.68
SYNE2-214ENST00000554928 ARPC4-TTLL3A0A0A6YYG9 625 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 UNC119BA6NIH7 251 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 TNFRSF11BO00300 401 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 HLA-HP01893 362 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CD3EP07766 207 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CD40P25942 277 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 ACVR1BP36896 505 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 NR1H2P55055 460 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CLRN1P58418 232 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 PRPS1P60891 318 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 RPL27P61353 136 aaKnown RBP10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CBX1P83916 185 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CHRNB3Q05901 458 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 PGBD2Q6P3X8 592 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF813Q6ZN06 617 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 RRM2BQ7LG56 351 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 FAM122BQ7Z309 247 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 TMEM179BQ7Z7N9 219 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 MDP1Q86V88 176 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 MAGEE2Q8TD90 523 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-214ENST00000554928 MCHR2Q969V1 340 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 SLCO4A1Q96BD0 722 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 RASD2Q96D21 266 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 LRGUKQ96M69 825 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 Q96M85 177 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 FOXB1Q99853 325 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 CHID1Q9BWS9 393 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 ESRP2Q9H6T0 727 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms