RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 NUDCD2Q8WVJ2 157 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 OR14A2Q96R54 314 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 MENTQ9BUN1 341 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 PIAS3Q9Y6X2 628 aa14.29□□□□□ -0.12
SYNE3-203ENST00000554873 A0A087X0M5 115 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1B0GX30 115 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MBTPS2O43462 519 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ERAL1O75616 437 aaKnown RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ADH1AP07327 375 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR4E1P0C645 316 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 GPR4P46093 362 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PCP4P48539 62 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 TAS2R38P59533 333 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF77Q15935 545 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 FAM46CQ5VWP2 391 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 CNKSR3Q6P9H4 555 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DRAM2Q6UX65 266 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF765Q7L2R6 523 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 AMZ2Q86W34 360 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 LSRQ86X29 649 aaPredicted RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 TGIF2LXQ8IUE1 241 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 GJD3Q8N144 294 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR2G2Q8NGZ5 317 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MISP3Q96FF7 219 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SAMD8Q96LT4 415 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 GFI1Q99684 422 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PIGQQ9BRB3 760 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MRI1Q9BV20 369 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 TGIF2Q9GZN2 237 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DUSP15Q9H1R2 295 aaPredicted RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PARPBPQ9NWS1 579 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ADAM29Q9UKF5 820 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 hCG_1809904A0A1W2PP81 198 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1W2PR64 198 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1W2PRV1 198 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OGG1O15527 345 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 CISD3P0C7P0 127 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR2B8PP59922 312 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 RPS15P62841 145 aaKnown RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DUSP2Q05923 314 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DPTQ07507 201 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MESP2Q0VG99 397 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 AIMP2Q13155 320 aaKnown RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ARHGAP19Q14CB8 494 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 TGIF1Q15583 401 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 NKPD1Q17RQ9 610 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF311Q5JNZ3 666 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DNLZQ5SXM8 178 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PIP5KL1Q5T9C9 394 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 VRK2Q86Y07 508 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 BAP18Q8IXM2 172 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 CCDC116Q8IYX3 515 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 C3orf49Q96BT1 292 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SMIM19Q96E16 107 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MACROD1Q9BQ69 325 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 UBQLN3Q9H347 655 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 POFUT1Q9H488 388 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 CACFD1Q9UGQ2 172 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 TIMM10BQ9Y5J6 103 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 NUMA1Q14980 2115 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SLC22A31A6NKX4 558 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MFNGO00587 321 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PPP1R3DO95685 299 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MRPL3P09001 348 aaKnown RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SLC2A1P11166 492 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SRMP19623 302 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 SSR2P43308 183 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 NAAAQ02083 359 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 ADAM5Q6NVV9 412 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 PPP1R1CQ8WVI7 109 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 DIO2Q92813 273 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MIB2Q96AX9 1013 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 MOGAT1Q96PD6 335 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
SYNE3-203ENST00000554873 OR5V1Q9UGF6 321 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 NTNG1Q9Y2I2 539 aa14.28□□□□□ -0.12
SYNE3-203ENST00000554873 A0A1W2PS29 197 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 TSTD3H0UI37 97 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 BCAT2O15382 392 aaPredicted RBP14.27□□□□□ -0.12
SYNE3-203ENST00000554873 KLF4O43474 513 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 CTNSO60931 367 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 GLSO94925 669 aaPredicted RBP14.27□□□□□ -0.12
SYNE3-203ENST00000554873 YIF1AO95070 293 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 IFNA17P01571 189 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 PRNPP04156 253 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 FAM157CP0CG43 387 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 CLDN12P56749 244 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 RPS11P62280 158 aaKnown RBP eCLIP14.27□□□□□ -0.12
SYNE3-203ENST00000554873 CSNK1G2P78368 415 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 ST3GAL3Q11203 375 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 LIPNQ5VXI9 398 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 TMPRSS11FQ6ZWK6 438 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 NUBPLQ8TB37 319 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 UPB1Q9UBR1 384 aa14.27□□□□□ -0.12
SYNE3-203ENST00000554873 TMEM184BQ9Y519 407 aaPredicted RBP14.27□□□□□ -0.12
SYNE3-203ENST00000554873 IFITM10A6NMD0 228 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms