RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 C2P06681 752 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 FOLR1P15328 257 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CMA1P23946 247 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 PRDX3P30048 256 aaKnown RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 SYKP43405 635 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 TMED10P49755 219 aaKnown RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 YWHAGP61981 247 aaKnown RBP eCLIP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CKAP4Q07065 602 aaKnown RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 AQP6Q13520 282 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 IDI1Q13907 227 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 GPNMBQ14956 572 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 GUCA2BQ16661 112 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 CASC10Q5T4H9 136 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 RAET1LQ5VY80 246 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 METAP1DQ6UB28 335 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 C6orf89Q6UWU4 347 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 OR4F15Q8NGB8 312 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 FAM81AQ8TBF8 368 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 SLC7A13Q8TCU3 470 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 STMN2Q93045 179 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 MYDGFQ969H8 173 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 NRIP2Q9BQI9 281 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 BPIFA3Q9BQP9 254 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 HDHD3Q9BSH5 251 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 DEFB127Q9H1M4 99 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 OR51M1Q9H341 326 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 NANOGQ9H9S0 305 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 EML4Q9HC35 981 aaKnown RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF160Q9HCG1 818 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 XCL2Q9UBD3 114 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 VANGL2Q9ULK5 521 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 PRG3Q9Y2Y8 225 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-213ENST00000554776 TMED5Q9Y3A6 229 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 ARHGAP23Q9P227 1491 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 FANCIQ9NVI1 1328 aa2.11□□□□□ -2.07
SCFD1-213ENST00000554776 ATRXP46100 2492 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SMCO3A2RU48 225 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF726A6NNF4 738 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 LRRIQ3A6PVS8 624 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 TCP11X1B4DZS4 312 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 C9JVG2 144 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 AIM2O14862 343 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SOX15O60248 233 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CDH16O75309 829 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CSF3P09919 207 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 GKN3PP0CG01 181 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF17P17021 662 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 RCC1P18754 421 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CCNCP24863 283 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CCNE1P24864 410 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 NUDT1P36639 197 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 NSG1P42857 185 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 RFX3P48380 749 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CCNHP51946 323 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SUB1P53999 127 aaKnown RBP eCLIP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 FGF8P55075 233 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SH3BGRP55822 239 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 RPS15P62841 145 aaKnown RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ECH1Q13011 328 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 PSG5Q15238 335 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ZSCAN26Q16670 478 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 LRRC10Q5BKY1 277 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 PPM1LQ5SGD2 360 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 C1orf185Q5T7R7 199 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 FRMPD2BQ6IN97 320 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ANKRD26P1Q6NSI1 321 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF621Q6ZSS3 439 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 OFCC1Q8IZS5 231 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SLC34A3Q8N130 599 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CEP112Q8N8E3 955 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC54Q8NEL0 328 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 ZNF502Q8TBZ5 544 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 CXorf40AQ8TE69 158 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 GEMIN6Q8WXD5 167 aaKnown RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 TMEM54Q969K7 222 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 DNAJC19Q96DA6 116 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 TSNARE1Q96NA8 513 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SH3GL1Q99961 368 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 C20orf24Q9BUV8 137 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 GABARAPL3Q9BY60 117 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 NEUROG2Q9H2A3 272 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 TMEM185BQ9H7F4 350 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 BEX1Q9HBH7 125 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 MMP26Q9NRE1 261 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 EXD2Q9NVH0 621 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 SLC25A37Q9NYZ2 338 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 GCNT4Q9P109 453 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 RPS6KB2Q9UBS0 482 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 GNPTGQ9UJJ9 305 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 PACSIN2Q9UNF0 486 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-213ENST00000554776 N6AMT1Q9Y5N5 214 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 PHLPP2Q6ZVD8 1323 aa2.1□□□□□ -2.07
SCFD1-213ENST00000554776 A0A1B0GVI7 797 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 A6NDX4 124 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 HIDE1A8MVS5 230 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 H6PDO95479 791 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 KRT6AP02538 564 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
SCFD1-213ENST00000554776 FGF4P08620 206 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms