RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 CD3EP07766 207 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 RRM2P31350 389 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 DAP3P51398 398 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 ZNF83P51522 516 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 SPIBQ01892 262 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 ZBED5Q49AG3 693 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 ADAM5Q6NVV9 412 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 KLHL17Q6TDP4 642 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 PAMR1Q6UXH9 720 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 ZNF627Q7L945 461 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 NINJ1Q92982 152 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 OBP2BQ9NPH6 170 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 EDARQ9UNE0 448 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 RNF115Q9Y4L5 304 aa11.29□□□□□ -0.6
MTHFD1-208ENST00000554739 AQP12BA6NM10 295 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 MCIDASD6RGH6 385 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 TRMUO75648 421 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 ATE1O95260 518 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 WNT11O96014 354 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 IGHG1P01857 330 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 IGHMP01871 453 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 QDPRP09417 244 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 ACADSP16219 412 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 PTAFRP25105 342 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CD40P25942 277 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 HOXC12P31275 282 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 RASSF2P50749 326 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 IST1P53990 364 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CTXN1P60606 82 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 TAF11Q15544 211 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 FAM98BQ52LJ0 330 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 TMEM108Q6UXF1 575 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 IGFN1Q86VF2 1251 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 AQP12AQ8IXF9 295 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 SYT14Q8NB59 555 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 TRIM15Q9C019 465 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CCM2LQ9NUG4 571 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 TMCC3Q9ULS5 477 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 POMPQ9Y244 141 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 SIGLEC7Q9Y286 467 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 POFUT2Q9Y2G5 429 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-208ENST00000554739 CELSR1Q9NYQ6 3014 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 ZNF503-AS2A6NEH8 195 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 M0R1B8 84 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 ABCD4O14678 606 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 DHHO43323 396 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 SEC14L2O76054 403 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 STAMBPO95630 424 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 RAF1P04049 648 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 RAP2AP10114 183 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CD53P19397 219 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 PAX7P23759 505 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 DNASE1P24855 282 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CLRN1P58418 232 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 UBE2NP61088 152 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 TUBA1BP68363 451 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 TUBA4AP68366 448 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 KLHL24Q6TFL4 600 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 TUBA1AQ71U36 451 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 HDDC2Q7Z4H3 204 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CCDC36Q8IYA8 594 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 ARIH2OSQ8N7S6 290 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 OR4C15Q8NGM1 316 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 RADILQ96JH8 1075 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 TSPAN32Q96QS1 320 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 UBTD1Q9HAC8 227 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 KRCC1Q9NPI7 259 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 B3GNT2Q9NY97 397 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 STX18Q9P2W9 335 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 CRNNQ9UBG3 495 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 SLC7A8Q9UHI5 535 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 AURKCQ9UQB9 309 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 LYVE1Q9Y5Y7 322 aa11.27□□□□□ -0.61
MTHFD1-208ENST00000554739 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
MTHFD1-208ENST00000554739 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
MTHFD1-208ENST00000554739 DHRS12A0PJE2 317 aa11.26□□□□□ -0.61
MTHFD1-208ENST00000554739 SHISA9B4DS77 424 aa11.26□□□□□ -0.61
MTHFD1-208ENST00000554739 TNFRSF11BO00300 401 aa11.26□□□□□ -0.61
MTHFD1-208ENST00000554739 HS3ST1O14792 307 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms