RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TMEM200CA6NKL6 621 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 GPX5O75715 221 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 OR1D4P47884 311 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 CASP6P55212 293 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MTCP1P56278 107 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 FAM78AQ5JUQ0 283 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 AFMIDQ63HM1 303 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ADGRF3Q8IZF5 1079 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 PSMF1Q92530 271 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 LRIT1Q9P2V4 623 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MYH9P35579 1960 aaKnown RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 TMED7-TICAM2A0A0A6YYA0 188 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 GABARAPH6UMI1 98 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ABLIM3O94929 683 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 CALCBP10092 127 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 ECI1P42126 302 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 SHEQ5VZ18 495 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MED25Q71SY5 747 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 MDGA2Q7Z553 956 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 LILRA3Q8N6C8 439 aaPredicted RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
VTI1B-204ENST00000554659 TMED7Q9Y3B3 224 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 WIF1Q9Y5W5 379 aa12.87□□□□□ -0.35
VTI1B-204ENST00000554659 BET1O15155 118 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 CD38P28907 300 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TLE4Q04727 773 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 MEP1BQ16820 701 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 OR1E3Q8WZA6 343 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 EMC9Q9Y3B6 208 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 DDAH2O95865 285 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 FABP6P51161 128 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 KIAA1024LP59773 190 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 ATPAF1Q5TC12 328 aaPredicted RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TEAD3Q99594 435 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TMEM43Q9BTV4 400 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SELENOIQ9C0D9 397 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SULT1C4O75897 302 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 GIPP09681 153 aaPredicted RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 GDF1P27539 372 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TRHRP34981 398 aaPredicted RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 NPBWR1P48145 328 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TPMTP51580 245 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 IHHQ14623 411 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF684Q5T5D7 378 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 NPSR1Q6W5P4 371 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 OR52H1Q8NGJ2 320 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 ARRDC5A6NEK1 342 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SIX6O95475 246 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SBK2P0C263 348 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 RBM45Q8IUH3 476 aaKnown RBP12.86□□□□□ -0.35
VTI1B-204ENST00000554659 NUDT8Q8WV74 236 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 TSSK2Q96PF2 358 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 LYSMD1Q96S90 227 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 DUSP22Q9NRW4 184 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 SLC39A9Q9NUM3 307 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 MMACHCQ9Y4U1 282 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
VTI1B-204ENST00000554659 HMGN4O00479 90 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 BCKDHBP21953 392 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 CPT2P23786 658 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 CLINT1Q14677 625 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 TMUB2Q71RG4 321 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF511Q8NB15 262 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 HPSE2Q8WWQ2 592 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 MRPL38Q96DV4 380 aaKnown RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 LRFN5Q96NI6 719 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 GSX2Q9BZM3 304 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 PDFQ9HBH1 243 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 LYRM4Q9HD34 91 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 NIT2Q9NQR4 276 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SMCO4Q9NRQ5 59 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ANKRD34BA5PLL1 514 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ADAM10O14672 748 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 CTNSO60931 367 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ITGB8P26012 769 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms