RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 EFNB1P98172 346 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 SKP2Q13309 424 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 GINS1Q14691 196 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 QPRTQ15274 297 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 TOMM34Q15785 309 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM176BQ3YBM2 270 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF474Q6S9Z5 364 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF610Q8N9Z0 462 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 OR6K3Q8NGY3 331 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 TEX47Q8TBZ9 253 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 CPNE4Q96A23 557 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ARSGQ96EG1 525 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 GPA33Q99795 319 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 PRSS27Q9BQR3 290 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 PRRG3Q9BZD7 231 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 LAT2Q9GZY6 243 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 FANCFQ9NPI8 374 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 ST6GALNAC2Q9UJ37 374 aa11.07□□□□□ -0.64
SHMT2-214ENST00000554604 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
SHMT2-214ENST00000554604 DSCAMO60469 2012 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 C16orf97H3BN30 126 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 M0R129 80 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SLC22A1O15245 554 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SS18L1O75177 396 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-214ENST00000554604 ENTPD6O75354 484 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-214ENST00000554604 LYPD3O95274 346 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 CGAP01215 116 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 LCKP06239 509 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 PGCP20142 388 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 PSMB9P28065 219 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 HTR2AP28223 471 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SHC1P29353 583 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 UGT2B10P36537 528 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 PCYT1AP49585 367 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 HOXC5Q00444 222 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 ST3GAL4Q11206 333 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SELENBP1Q13228 472 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 POU4F3Q15319 338 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 GUSBP1Q15486 140 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 OR1Q1Q15612 314 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 CTF1Q16619 201 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 RNLSQ5VYX0 342 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SLC27A4Q6P1M0 643 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 P2RY8Q86VZ1 359 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM234Q8WY98 164 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 ROBO4Q8WZ75 1007 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 ST8SIA1Q92185 356 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 NINJ1Q92982 152 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 FAM46AQ96IP4 442 aaKnown RBP11.06□□□□□ -0.64
SHMT2-214ENST00000554604 WFIKKN1Q96NZ8 548 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 DCUN1D5Q9BTE7 237 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 LIME1Q9H400 295 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 AMBNQ9NP70 447 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SERINC1Q9NRX5 453 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SLC7A7Q9UM01 511 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 SLC35A3Q9Y2D2 325 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 PLEKHA6Q9Y2H5 1048 aa11.06□□□□□ -0.64
SHMT2-214ENST00000554604 ACANP16112 2415 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 SETD2Q9BYW2 2564 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-214ENST00000554604 EFNA2O43921 213 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 BCL10O95999 233 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 ADORA3P0DMS8 318 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 PRG2P13727 222 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TGFBR2P37173 567 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-214ENST00000554604 PLAURQ03405 335 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 RNPS1Q15287 305 aaKnown RBP11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TESK1Q15569 626 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
SHMT2-214ENST00000554604 SLC25A53Q5H9E4 307 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 ACSM5Q6NUN0 579 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 C3orf33Q6P1S2 294 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF367Q7RTV3 350 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF563Q8TA94 476 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM255BQ8WV15 326 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 HS6ST2Q96MM7 605 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TRIM2Q9C040 744 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 RACGAP1Q9H0H5 632 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 IL20Q9NYY1 176 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TVP23BQ9NYZ1 205 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 SELENONQ9NZV5 590 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM5Q9Y2B1 443 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
SHMT2-214ENST00000554604 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 A0A1W2PNR3 127 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 IRGMA1A4Y4 181 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms