RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 TUBA4AP68366 448 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 CAMK2DQ13557 499 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 RAB35Q15286 201 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 EFNB3Q15768 340 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 SWI5Q1ZZU3 235 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 LRRC23Q53EV4 343 aaPredicted RBP9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 PHYHD1Q5SRE7 291 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 CARD17Q5XLA6 110 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 C8orf82Q6P1X6 216 aaPredicted RBP9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 CLEC2AQ6UVW9 174 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 HACD2Q6Y1H2 254 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 DEF8Q6ZN54 512 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 TUBA1AQ71U36 451 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 SLC35D2Q76EJ3 337 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 SLC46A3Q7Z3Q1 461 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 HDDC2Q7Z4H3 204 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 NANOGNBQ7Z5D8 188 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 SLC15A3Q8IY34 581 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 POU5F2Q8N7G0 328 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 LIPHQ8WWY8 451 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 LZICQ8WZA0 190 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 TMEM54Q969K7 222 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 FOXB1Q99853 325 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 RHNO1Q9BSD3 238 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 REG4Q9BYZ8 158 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 ZNF442Q9H7R0 627 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 EFCAB1Q9HAE3 211 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 FBXL3Q9UKT7 428 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 POFUT2Q9Y2G5 429 aa9.04□□□□□ -0.96
PTCD2P1-201ENST00000554393 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 B9A039 149 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 C11orf98E9PRG8 122 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 RNF13O43567 381 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SSX4O60224 188 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 OR7A10O76100 309 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 CSF3P09919 207 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 TSPAN19P0C672 248 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 TNFRSF1BP20333 461 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 CALCRP30988 508 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SERPINF1P36955 418 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 IDH3GP51553 393 aaPredicted RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 EFNA4P52798 201 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 UGT2B15P54855 530 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 LIPEQ05469 1076 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 ST3GAL3Q11203 375 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 PIN1Q13526 163 aaPredicted RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 GSG1Q2KHT4 349 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 NRN1LQ496H8 165 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 ZNF813Q6ZN06 617 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 PIWIL3Q7Z3Z3 882 aaKnown RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 MDP1Q86V88 176 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 NKAIN4Q8IVV8 208 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 WDFY1Q8IWB7 410 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 LRRC17Q8N6Y2 441 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 TMEM255BQ8WV15 326 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 TMEM239Q8WW34 195 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 ZNF566Q969W8 418 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SGTBQ96EQ0 304 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 PRRC1Q96M27 445 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 SEPHS2Q99611 448 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 GLTPQ9NZD2 209 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 STX18Q9P2W9 335 aaKnown RBP9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 MED31Q9Y3C7 131 aa9.03□□□□□ -0.96
PTCD2P1-201ENST00000554393 IGHV2OR16-5A0A0B4J2B6 119 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 VSTM5A8MXK1 200 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 NME4O00746 187 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 MGRN1O60291 552 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 SHOX2O60902 331 aaPredicted RBP9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 SERPINI2O75830 405 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 SEC14L2O76054 403 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 UBL3O95164 117 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 BCL10O95999 233 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 IGHG1P01857 330 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 HLA-HP01893 362 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 OR4A8P0C604 315 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 PGA4P0DJD7 388 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 PGA3P0DJD8 388 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 UMPSP11172 480 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 B4GALT1P15291 398 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 FUT1P19526 365 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 PRDX6P30041 224 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 CAPZA2P47755 286 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 OR1E2P47887 323 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 SLC7A2P52569 658 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 HGFACQ04756 655 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 RPL18Q07020 188 aaKnown RBP9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 KRTAP1-1Q07627 177 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 ADIPOQQ15848 244 aa9.02□□□□□ -0.97
PTCD2P1-201ENST00000554393 HIST3H3Q16695 136 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms