RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRPS1P60891 318 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 RPS4XP62701 263 aaKnown RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 SELENOWP63302 87 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 ROR2Q01974 943 aaKnown RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 LGALS3BPQ08380 585 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 FOXD4Q12950 439 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 TBRG1Q3YBR2 411 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 HIKESHIQ53FT3 197 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 Q5PR19 223 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 C6orf52Q5T4I8 152 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 PXKQ7Z7A4 578 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 KRTAP1-3Q8IUG1 177 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 GPR137CQ8N3F9 429 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 CBR4Q8N4T8 237 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 WDR31Q8NA23 367 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 WFDC11Q8NEX6 87 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 PRSS27Q9BQR3 290 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 NANSQ9NR45 359 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 FAIMQ9NVQ4 179 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF229Q9UJW7 825 aa11.44□□□□□ -0.58
SHMT2-211ENST00000554310 SAMD4AQ9UPU9 718 aaKnown RBP11.44□□□□□ -0.58
SHMT2-211ENST00000554310 ALPK2Q86TB3 2170 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 DPPA5A6NC42 116 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 MS4A18H0YCH9 400 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 M0R1B8 84 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 OR6A2O95222 327 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 CH25HO95992 272 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 IGF2P01344 180 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ADORA3P0DMS8 318 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 IFNA8P32881 189 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 PTH2RP49190 550 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 UBE2NP61088 152 aaKnown RBP11.43□□□□□ -0.58
SHMT2-211ENST00000554310 MS4A18Q3C1V0 323 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ANKRD16Q6P6B7 361 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 SLC22A25Q6T423 547 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 NANOGNBQ7Z5D8 188 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 MAGEE2Q8TD90 523 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-211ENST00000554310 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 PERPQ96FX8 193 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 TPD52L3Q96J77 140 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 PRRC1Q96M27 445 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ANKRD60Q9BZ19 345 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF696Q9H7X3 374 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-211ENST00000554310 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 DNAJB9Q9UBS3 223 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 OAZ3Q9UMX2 235 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF469Q96JG9 3925 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HEATR1Q9H583 2144 aaKnown RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 DLGAP1O14490 977 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 SERPINA1P01009 418 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 MT-ND1P03886 318 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HIST1H2ABP04908 130 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 IFNW1P05000 195 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 DANCRP0C864 163 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 FOSL1P15407 271 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 AHCYP23526 432 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 OR1E2P47887 323 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 ZP4Q12836 540 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 NHLRC1Q6VVB1 395 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HIST3H2AQ7L7L0 130 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 SLC46A3Q7Z3Q1 461 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 C20orf196Q8IYI0 205 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 DEPDC4Q8N2C3 294 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 PIAS4Q8N2W9 510 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 FAM86B1Q8N7N1 296 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 SMAP2Q8WU79 429 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 GEMIN6Q8WXD5 167 aaKnown RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 TFAP2CQ92754 450 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 BCL2L2Q92843 193 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 HIST1H2ACQ93077 130 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 PYURFQ96I23 114 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 LRR1Q96L50 414 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 ADAD1Q96M93 576 aaKnown RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 NELFAQ9H3P2 528 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 NTN4Q9HB63 628 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 CRLF2Q9HC73 371 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 MEPEQ9NQ76 525 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 DLL4Q9NR61 685 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 MED29Q9NX70 200 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 V9GYQ6 96 aa11.42□□□□□ -0.58
SHMT2-211ENST00000554310 NSD1Q96L73 2696 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-211ENST00000554310 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
SHMT2-211ENST00000554310 SLC35F4A4IF30 521 aa11.41□□□□□ -0.58
SHMT2-211ENST00000554310 HTR3EA5X5Y0 456 aa11.41□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF726A6NNF4 738 aa11.41□□□□□ -0.58
SHMT2-211ENST00000554310 ZNF99A8MXY4 864 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms