RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PHYHIPQ92561 330 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 MMABQ96EY8 250 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 S100A16Q96FQ6 103 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 REPIN1Q9BWE0 567 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 NXF5Q9H1B4 397 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 SYT4Q9H2B2 425 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF275Q9NSD4 429 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 CLEC1BQ9P126 229 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 KCNG2Q9UJ96 466 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 BRWD1Q9NSI6 2320 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TRBV5-7A0A0A0MS05 114 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PLSCR5A0PG75 271 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 A8MUA0 341 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 C10orf142B7Z368 130 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PRAF2O60831 178 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF254O75437 659 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 NDUFB6O95139 128 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 CALCBP10092 127 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ART1P52961 327 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PSMD4P55036 377 aaKnown RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 HTR4Q13639 388 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 OPCMLQ14982 345 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TOMM34Q15785 309 aaPredicted RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 WDR38Q5JTN6 314 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC6A19Q695T7 634 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF595Q8IYB9 648 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PM20D2Q8IYS1 436 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR4C16Q8NGL9 310 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR5M1Q8NGP8 315 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR2G2Q8NGZ5 317 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZDHHC1Q8WTX9 485 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TAAR8Q969N4 342 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PPP1R14AQ96A00 147 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TMEM106AQ96A25 262 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 MSANTD3Q96H12 275 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 LRRC61Q9BV99 259 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC19A3Q9BZV2 496 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 EMC3Q9P0I2 261 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 GMEB2Q9UKD1 530 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 FBXL3Q9UKT7 428 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 COL5A1P20908 1838 aaPredicted RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SPTY2D1-AS1A0A0U1RR47 76 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 A0A1W2PPL8 197 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 CDC14CA4D256 554 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 NAP1L6A6NFF2 107 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ANXA2P2A6NMY6 339 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ACOT7O00154 380 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 UTS2O95399 124 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 PLGP00747 810 aaPredicted RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 IFNA7P01567 189 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ANXA2P07355 339 aaKnown RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 RAB40ALP0C0E4 278 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 THEGLP0DJG4 465 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 RRASP10301 218 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TACR3P29371 465 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 RABIFP47224 123 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 GABRA4P48169 554 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 EPHA4P54764 986 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 GFERP55789 205 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 H2BFSP57053 126 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 AP3S2P59780 193 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 DHODHQ02127 395 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SHHQ15465 462 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 DCAF12L2Q5VW00 463 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 ARMC6Q6NXE6 501 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 FAM198BQ6UWH4 519 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 LRRN1Q6UXK5 716 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 CHRDL2Q6WN34 429 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 DNM1P46Q6ZS02 220 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC35D2Q76EJ3 337 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 SIX5Q8N196 739 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR51D1Q8NGF3 324 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 RAB40AQ8WXH6 277 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TSLPQ969D9 159 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 MARVELD3Q96A59 401 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 MRPL48Q96GC5 212 aaKnown RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 CXorf58Q96LI9 332 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 UTP23Q9BRU9 249 aaKnown RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 S1PR5Q9H228 398 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TAS2R5Q9NYW4 299 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 FBXO9Q9UK97 447 aaPredicted RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 CYP8B1Q9UNU6 501 aa6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 MRPS33Q9Y291 106 aaKnown RBP6.28□□□□□ -1.4
LINC-ROR-201ENST00000553704 TMEM272A0A1B0GTI8 110 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 A0A1B0GTQ1 180 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 C17orf105B2RV13 164 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 C11orf98E9PRG8 122 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 TEX46H3BTG2 121 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 SULT1B1O43704 296 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 SUSD5O60279 629 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 CREBL2O60519 120 aaPredicted RBP6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 ICOSLGO75144 302 aa6.27□□□□□ -1.41
LINC-ROR-201ENST00000553704 CTAG2O75638 210 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms