RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CPSF4LA6NMK7 179 aaKnown RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 LRRN3E7EW58 273 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 SLC43A1O75387 559 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 KRT33AO76009 404 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 PDE5AO76074 875 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 MT-ATP6P00846 226 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 OR4A8P0C604 315 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 HLA-DOBP13765 273 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 CDH2P19022 906 aaPredicted RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 IL2RGP31785 369 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 PPOXP50336 477 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 CDH15P55291 814 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ROR2Q01974 943 aaKnown RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 EFNB3Q15768 340 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ERICH5Q6P6B1 374 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 DEF8Q6ZN54 512 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 SNX32Q86XE0 403 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 TMEM123Q8N131 208 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ZNF786Q8N393 782 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 RNF217Q8TC41 542 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 FAM216AQ8WUB2 273 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 OR2M2Q96R28 347 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 SNX18Q96RF0 628 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ECSITQ9BQ95 431 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 PRSS27Q9BQR3 290 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 ASPNQ9BXN1 380 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 CRNNQ9UBG3 495 aaPredicted RBP10.22□□□□□ -0.77
SRP54-203ENST00000553544 USP22Q9UPT9 525 aa10.22□□□□□ -0.77
SRP54-203ENST00000553544 IGHV1-18A0A0C4DH31 117 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 TRAPPC13A5PLN9 417 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 B4DSR2 109 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 FAM157AC9JC47 383 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 PLPP3O14495 311 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 PRDX6P30041 224 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 SH3BGRP55822 239 aaPredicted RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 PMS2P3Q13401 168 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 C1DQ13901 141 aaKnown RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 ADIPOQQ15848 244 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 C3orf36Q3SXR2 165 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 PHYHD1Q5SRE7 291 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 GKAP1Q5VSY0 366 aaPredicted RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 ANKRD16Q6P6B7 361 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 RINLQ6ZS11 566 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 PXKQ7Z7A4 578 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 WDFY1Q8IWB7 410 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 UEVLDQ8IX04 471 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 FAM169BQ8N8A8 192 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 SEMA6DQ8NFY4 1073 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 VANGL1Q8TAA9 524 aaPredicted RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 TXNDC15Q96J42 360 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 MPP4Q96JB8 637 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 LRR1Q96L50 414 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 HOPXQ9BPY8 73 aaPredicted RBP10.21□□□□□ -0.77
SRP54-203ENST00000553544 SLC19A3Q9BZV2 496 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 EFCAB1Q9HAE3 211 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 GPR35Q9HC97 309 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 NDE1Q9NXR1 346 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 ARMCX1Q9P291 453 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 ARL2BPQ9Y2Y0 163 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
SRP54-203ENST00000553544 FAM220BPB1ANY3 271 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 TRIM77I1YAP6 450 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 AKAP8O43823 692 aaKnown RBP10.2□□□□□ -0.78
SRP54-203ENST00000553544 IFNA14P01570 189 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 IGKV3-15P01624 115 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 IGLV1-44P01699 117 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 IFNGR1P15260 489 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
SRP54-203ENST00000553544 DRD4P21917 467 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 MNAT1P51948 309 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 SEC24CP53992 1094 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 ARF1P84077 181 aaKnown RBP10.2□□□□□ -0.78
SRP54-203ENST00000553544 PUDPQ08623 228 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 ZP4Q12836 540 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 ZNF74Q16587 644 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 CEACAM16Q2WEN9 425 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 TTC33Q6PID6 262 aaPredicted RBP10.2□□□□□ -0.78
SRP54-203ENST00000553544 VHLLQ6RSH7 139 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 GLCCI1Q86VQ1 547 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 C20orf196Q8IYI0 205 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 OR4F15Q8NGB8 312 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 OR5J2Q8NH18 312 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 UBASH3BQ8TF42 649 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 SLC38A2Q96QD8 506 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 LRRC37BQ96QE4 947 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 EMC6Q9BV81 110 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 KATNB1Q9BVA0 655 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 CRLF2Q9HC73 371 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 MED29Q9NX70 200 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 TAS2R5Q9NYW4 299 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 BAG5Q9UL15 447 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 SLC7A7Q9UM01 511 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 PCDHB10Q9UN67 800 aa10.2□□□□□ -0.78
SRP54-203ENST00000553544 SH3GLB1Q9Y371 365 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms