RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 IQCF3P0C7M6 154 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 GNA11P29992 359 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 CYB561P49447 251 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 CASP4P49662 377 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 SLC7A9P82251 487 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 SYCNQ0VAF6 134 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 DUSP7Q16829 419 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 VAX1Q5SQQ9 334 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 UTS2BQ765I0 119 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 ZADH2Q8N4Q0 377 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 FAM133AQ8N9E0 248 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 IPMKQ8NFU5 416 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 OR52H1Q8NGJ2 320 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 WFIKKN1Q96NZ8 548 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 CLCC1Q96S66 551 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 RMND5AQ9H871 391 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 MRPL47Q9HD33 250 aaKnown RBP2.12□□□□□ -2.07
GPN3-209ENST00000551079 EXD2Q9NVH0 621 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 SMOXQ9NWM0 555 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 SHANK1Q9Y566 2161 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 WDR62O43379 1518 aa2.12□□□□□ -2.07
GPN3-209ENST00000551079 IGHV5-10-1A0A0J9YXX1 117 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 K7EQM0 130 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 POLR2DO15514 142 aaKnown RBP2.11□□□□□ -2.07
GPN3-209ENST00000551079 MED7O43513 233 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 SCGNO76038 276 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 DIRAS1O95057 198 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 SLC25A14O95258 325 aaPredicted RBP2.11□□□□□ -2.07
GPN3-209ENST00000551079 IGHV1-8P0DP01 117 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 HMGB2P26583 209 aaKnown RBP2.11□□□□□ -2.07
GPN3-209ENST00000551079 PSMA5P28066 241 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 CD34P28906 385 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 NAMPTP43490 491 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 NCBP1Q09161 790 aaKnown RBP2.11□□□□□ -2.07
GPN3-209ENST00000551079 ERCC8Q13216 396 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 AQP6Q13520 282 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 SFT2D3Q587I9 215 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 HES5Q5TA89 166 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 RAET1LQ5VY80 246 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 SLC25A24Q6NUK1 477 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 STRADAQ7RTN6 431 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 WDR86Q86TI4 376 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 RIMKLAQ8IXN7 391 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 OSR2Q8N2R0 312 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 MREGQ8N565 214 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 ZNF607Q96SK3 696 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 LY9Q9HBG7 655 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 WFDC1Q9HC57 220 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 PACSIN2Q9UNF0 486 aaPredicted RBP2.11□□□□□ -2.07
GPN3-209ENST00000551079 AP1M2Q9Y6Q5 423 aa2.11□□□□□ -2.07
GPN3-209ENST00000551079 ITGB4P16144 1822 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 HSD17B6O14756 317 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 RAMP3O60896 148 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 CBR3O75828 277 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 GAPDHP04406 335 aaKnown RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 CCR1P32246 355 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 GRIA1P42261 906 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 OR5I1Q13606 314 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 KLHL38Q2WGJ6 581 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 DMRTC1Q5HYR2 192 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 OR2T3Q8NH03 318 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 SYAP1Q96A49 352 aaPredicted RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 SECISBP2Q96T21 854 aaKnown RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 GABARAPL3Q9BY60 117 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 YY1AP1Q9H869 796 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 HMG20AQ9NP66 347 aa2.1□□□□□ -2.07
GPN3-209ENST00000551079 MRPS7Q9Y2R9 242 aaKnown RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 DDX49Q9Y6V7 483 aaKnown RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 GPATCH8Q9UKJ3 1502 aaKnown RBP2.1□□□□□ -2.07
GPN3-209ENST00000551079 YEATS2Q9ULM3 1422 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 ATP10AO60312 1499 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 OR5B21A6NL26 309 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 OPRD1P41143 372 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 DUSP3P51452 185 aaPredicted RBP2.09□□□□□ -2.07
GPN3-209ENST00000551079 NCBP2P52298 156 aaKnown RBP eCLIP2.09□□□□□ -2.07
GPN3-209ENST00000551079 OR4F3Q6IEY1 312 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 CNIH2Q6PI25 160 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 LINC00173Q6ZV60 143 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 VSTM4Q8IW00 320 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 MFSD9Q8NBP5 474 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 GMCL1P1Q8NEA9 526 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 CXorf40BQ96DE9 158 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 PARD6BQ9BYG5 372 aa2.09□□□□□ -2.07
GPN3-209ENST00000551079 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
GPN3-209ENST00000551079 CEMIPQ8WUJ3 1361 aa2.09□□□□□ -2.08
GPN3-209ENST00000551079 PTPRTO14522 1441 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 CIB4A0PJX0 185 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 RAD51BO15315 384 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 UPK3AO75631 287 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 TCN1P20061 433 aaPredicted RBP2.08□□□□□ -2.08
GPN3-209ENST00000551079 CX3CR1P49238 355 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 CCR8P51685 355 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 RPS21P63220 83 aaKnown RBP2.08□□□□□ -2.08
GPN3-209ENST00000551079 ZNF816Q0VGE8 651 aaPredicted RBP2.08□□□□□ -2.08
GPN3-209ENST00000551079 PLD1Q13393 1074 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 IGFBP7Q16270 282 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 FILIP1LQ4L180 1135 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 NTM-AS1Q6ZSK4 140 aa2.08□□□□□ -2.08
GPN3-209ENST00000551079 PIANPQ8IYJ0 282 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms