RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-215	ENST00000550828	ZNF610	Q8N9Z0	462 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR6X1	Q8NH79	312 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	TEX47	Q8TBZ9	253 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF570	Q96NI8	536 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	KCNK17	Q96T54	332 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	DDO	Q99489	341 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	TACO1	Q9BSH4	297 aa	Known RBP	11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	MRPL13	Q9BYD1	178 aa	Known RBP	11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	RIBC2	Q9H4K1	309 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC7A10	Q9NS82	523 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC5A6	Q9Y289	635 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	EMC9	Q9Y3B6	208 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	ICE1	Q9Y2F5	2266 aa		11.93	□□□□□ -0.5
ERBB3-215	ENST00000550828	DOPEY1	Q5JWR5	2465 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	IGKV1D-43	A0A0B4J1Z2	117 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	BCL10	O95999	233 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	ACADS	P16219	412 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	HIST1H1C	P16403	213 aa	Known RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	BMP5	P22003	454 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	ACVR1B	P36896	505 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	CDKN2A	P42771	156 aa	Known RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	GIPR	P48546	466 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	PTDSS1	P48651	473 aa	Known RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	ESRRG	P62508	458 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	NPRL3	Q12980	569 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	PTGES3	Q15185	160 aa	Known RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	HIST3H3	Q16695	136 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC35F1	Q5T1Q4	408 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLX4IP	Q5VYV7	408 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	C12orf73	Q69YU5	71 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	C20orf196	Q8IYI0	205 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	PACRGL	Q8N7B6	248 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	SYT14	Q8NB59	555 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	NOXO1	Q8NFA2	376 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR52L1	Q8NGH7	329 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	TMEM54	Q969K7	222 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF837	Q96EG3	531 aa	Predicted RBP	11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	GRIP2	Q9C0E4	1043 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	PLSCR4	Q9NRQ2	329 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	JKAMP	Q9P055	326 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	CREBBP	Q92793	2442 aa		11.92	□□□□□ -0.5
ERBB3-215	ENST00000550828	MRPL33	O75394	65 aa	Known RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	CD8B	P10966	210 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	GRK5	P34947	590 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	RPS6KA3	P51812	740 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	FMOD	Q06828	376 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	TAF11	Q15544	211 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	GPR139	Q6DWJ6	353 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC27A4	Q6P1M0	643 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	LRFN4	Q6PJG9	635 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	NPEPL1	Q8NDH3	523 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	SDR9C7	Q8NEX9	313 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR2T33	Q8NG76	320 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR4K13	Q8NH42	304 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	APH1A	Q96BI3	265 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC25A44	Q96H78	314 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	ADAD1	Q96M93	576 aa	Known RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	PITX2	Q99697	317 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLCO5A1	Q9H2Y9	848 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	FN3K	Q9H479	309 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	SMPD3	Q9NY59	655 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	GRHPR	Q9UBQ7	328 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	ADGRG4	Q8IZF6	3080 aa		11.91	□□□□□ -0.5
ERBB3-215	ENST00000550828	RTTN	Q86VV8	2226 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC22A23	A1A5C7	686 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	PRSS37	A4D1T9	235 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR6C68	A6NDL8	312 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828		A6NIZ1	184 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	FAM90A27P	A6NNH2	459 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	DCTN6	O00399	190 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	SURF4	O15260	269 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	ARHGEF9	O43307	516 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	PRKY	O43930	277 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC43A1	O75387	559 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	AGFG2	O95081	481 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	NOS3	P29474	1203 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	CHRNB4	P30926	498 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	OPRM1	P35372	400 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF133	P52736	654 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	RAD23A	P54725	363 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	AQP4	P55087	323 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	RAP1B	P61224	184 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	RAP1A	P62834	184 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	MYBPC1	Q00872	1141 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	CRMP1	Q14194	572 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	FAM205BP	Q63HN1	556 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	LUZP2	Q86TE4	346 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	ZNF100	Q8IYN0	542 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	GABRG1	Q8N1C3	465 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	CYB561A3	Q8NBI2	242 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	SLC37A3	Q8NCC5	494 aa		11.9	□□□□□ -0.5
ERBB3-215	ENST00000550828	OR52E2	Q8NGJ4	325 aa		11.9	□□□□□ -0.5

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