RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
CACNB3-217ENST00000550483 MS4A18Q3C1V0 323 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 SLC35D2Q76EJ3 337 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ZBTB46Q86UZ6 589 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 SLC35F2Q8IXU6 374 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ATP6V1C2Q8NEY4 427 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 TM9SF4Q92544 642 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 SFXN2Q96NB2 322 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ALG8Q9BVK2 526 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
CACNB3-217ENST00000550483 MARCH7Q9H992 704 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ASB6Q9NWX5 421 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ANKRD10Q9NXR5 420 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 TAS2R16Q9NYV7 291 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 COL12A1Q99715 3063 aa11.28□□□□□ -0.6
CACNB3-217ENST00000550483 ATMQ13315 3056 aa11.27□□□□□ -0.6
CACNB3-217ENST00000550483 ARPC4-TTLL3A0A0A6YYG9 625 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 TRABD2BA6NFA1 517 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SERPINI2O75830 405 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 C1QL1O75973 258 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 CD1AP06126 327 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF43P17038 809 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 GABRA5P31644 462 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 B3GALT5-AS1P59052 145 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 RAC3P60763 192 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 ARG2P78540 354 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-217ENST00000550483 GLO1Q04760 184 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 C19orf57Q0VDD7 668 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 TMEM225Q6GV28 225 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SPINK14Q6IE38 97 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 IGFL2Q6UWQ7 119 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 LINC00696Q6ZRV3 163 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 USP43Q70EL4 1123 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 VASH2Q86V25 355 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SLC22A16Q86VW1 577 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF485Q8NCK3 441 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 FAM83FQ8NEG4 500 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-217ENST00000550483 OR6K6Q8NGW6 343 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SCMH1Q96GD3 660 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 RBP7Q96R05 134 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 NPAS1Q99742 590 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF649Q9BS31 505 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 TSPAN10Q9H1Z9 355 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-217ENST00000550483 BABAM2Q9NXR7 383 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 STUB1Q9UNE7 303 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 PCSK5Q92824 1860 aa11.27□□□□□ -0.61
CACNB3-217ENST00000550483 SLC22A23A1A5C7 686 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 G3V3Y1 287 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 AKR7A3O95154 331 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ATE1O95260 518 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 WISP1O95388 367 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 IGHG1P01857 330 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ADRA2AP08913 450 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 TACSTD2P09758 323 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 GAAP10253 952 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 IFNGR1P15260 489 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 POU3F2P20265 443 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 IL11P20809 199 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SFTPDP35247 375 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 H3F3AP84243 136 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 LSAMPQ13449 338 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 DGUOKQ16854 277 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 CCDC58Q4VC31 144 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 THEM4Q5T1C6 240 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 PLEKHG7Q6ZR37 379 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SHFQ7M4L6 423 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 LHFPL3Q86UP9 236 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SULF2Q8IWU5 870 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 PHC2Q8IXK0 858 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ZFP62Q8NB50 900 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ASB17Q8WXJ9 295 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ZMYND19Q96E35 227 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SLC25A44Q96H78 314 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SIGLEC12Q96PQ1 595 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 INTS14Q96SY0 518 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 NAA50Q9GZZ1 169 aaKnown RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-217ENST00000550483 DEPPQ9NTK1 212 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 KLHL13Q9P2N7 655 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 B9D1Q9UPM9 204 aa11.26□□□□□ -0.61
CACNB3-217ENST00000550483 A3GALT2U3KPV4 340 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms