RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 SHARPINQ9H0F6 387 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 NANOGQ9H9S0 305 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 NOX3Q9HBY0 568 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 DYNLRB1Q9NP97 96 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 TAS2R5Q9NYW4 299 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 GLTPQ9NZD2 209 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 AP3M1Q9Y2T2 418 aa9.42□□□□□ -0.9
VTI1BP3-201ENST00000550220 A0A1W2PRG6 482 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 RNF13O43567 381 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 LMX1BO60663 402 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 HLA-HP01893 362 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 CELA3BP08861 270 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 ASAH2BP0C7U1 165 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 IGHV4-31P0DP07 118 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 UMPSP11172 480 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 NR2C1P13056 603 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF35P13682 527 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 APEHP13798 732 aaKnown RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 DAOP14920 347 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 B4GALT1P15291 398 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 H2AFXP16104 143 aaPredicted RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 HNF1AP20823 631 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GIFP27352 417 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 RBM34P42696 430 aaKnown RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GZMMP51124 257 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 ARFIP2P53365 341 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 SELENOVP59797 346 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 SNTB2Q13425 540 aaKnown RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 SELPLGQ14242 412 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GGTLC2Q14390 218 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 CARTPTQ16568 116 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 PHYHD1Q5SRE7 291 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GKAP1Q5VSY0 366 aaPredicted RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 FAM166AQ6J272 317 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF786Q8N393 782 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 VANGL1Q8TAA9 524 aaPredicted RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 HPS1Q92902 700 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM54Q969K7 222 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 MRPL24Q96A35 216 aaKnown RBP9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 TAMM41Q96BW9 452 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM120AQ9BXJ8 343 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 LRMDAQ9H2I8 198 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 C1orf198Q9H425 327 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 KCNS2Q9ULS6 477 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC7A7Q9UM01 511 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 SH3GLB1Q9Y371 365 aa9.41□□□□□ -0.9
VTI1BP3-201ENST00000550220 COL6A5A8TX70 2615 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 LOC100289279A0A1B0GTE1 492 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 C11orf98E9PRG8 122 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC22A2O15244 555 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SYNGR3O43761 229 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SERPINI2O75830 405 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 LY6HO94772 140 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR5F1O95221 314 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 STAMBPO95630 424 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 IGHG1P01857 330 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 MT-ND1P03886 318 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SERPINA5P05154 406 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF14P17017 642 aaPredicted RBP9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF23P17027 643 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 GIPRP48546 466 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 DAP3P51398 398 aaKnown RBP9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 CHN2P52757 468 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 TAS2R41P59536 307 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 PIGFQ07326 219 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC36A2Q495M3 483 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 KRT80Q6KB66 452 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM53Q6P2H8 277 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 NANOGNBQ7Z5D8 188 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 CALHM3Q86XJ0 350 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SVOPLQ8N434 492 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC22A24Q8N4F4 322 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 OR1J2Q8NGS2 313 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 LIPHQ8WWY8 451 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 LZICQ8WZA0 190 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 KCNN2Q9H2S1 579 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 SLC7A8Q9UHI5 535 aa9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 ZNF346Q9UL40 294 aaKnown RBP9.4□□□□□ -0.9
VTI1BP3-201ENST00000550220 TMEM129A0AVI4 362 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 SH3PXD2BA1X283 911 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 GMNCA6NCL1 334 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF503-AS2A6NEH8 195 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 MCIDASD6RGH6 385 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 LRRN3E7EW58 273 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 BLOC1S5-TXNDC5H3BN57 136 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 M0R233 179 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 FBP2O00757 339 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 DHHO43323 396 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 SEC14L2O76054 403 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 LYPD3O95274 346 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 ADRA2AP08913 450 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms