RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 RGS7BPQ6MZT1 257 aaPredicted RBP11.64□□□□□ -0.55
TROAP-211ENST00000549891 FAHD2BQ6P2I3 314 aaPredicted RBP11.64□□□□□ -0.55
TROAP-211ENST00000549891 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 USP43Q70EL4 1123 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 LRP11Q86VZ4 500 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 OR5J2Q8NH18 312 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 SGMS2Q8NHU3 365 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 SNX33Q8WV41 574 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 FAHD2AQ96GK7 314 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 TXNDC15Q96J42 360 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 C1orf198Q9H425 327 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 TREM2Q9NZC2 230 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 FZR1Q9UM11 496 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 PCDHB10Q9UN67 800 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 CORO2BQ9UQ03 480 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
TROAP-211ENST00000549891 PLPP3O14495 311 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 SERPINI2O75830 405 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 FARS2O95363 451 aaKnown RBP11.63□□□□□ -0.55
TROAP-211ENST00000549891 PTHP01270 115 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 ADORA3P0DMS8 318 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 OR8G3PP0DMU2 310 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 HOXB9P17482 250 aaPredicted RBP11.63□□□□□ -0.55
TROAP-211ENST00000549891 SLC6A2P23975 617 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 SLC18A1P54219 525 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 BIDP55957 195 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 TEKQ02763 1124 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 RAB39AQ14964 217 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 PCGF3Q3KNV8 242 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 LRIF1Q5T3J3 769 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 ACSM5Q6NUN0 579 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 TMEM154Q6P9G4 183 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 DPPA2Q7Z7J5 298 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 CARM1Q86X55 608 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 SLC22A24Q8N4F4 322 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 FAM216AQ8WUB2 273 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 GCDHQ92947 438 aaPredicted RBP11.63□□□□□ -0.55
TROAP-211ENST00000549891 YIPF5Q969M3 257 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 RAB39BQ96DA2 213 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 MOGAT1Q96PD6 335 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 OR52B2Q96RD2 323 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 RBM4Q9BWF3 364 aaKnown RBP11.63□□□□□ -0.55
TROAP-211ENST00000549891 SLC52A3Q9NQ40 469 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 NKIRAS1Q9NYS0 192 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 GLTPQ9NZD2 209 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 MYEF2Q9P2K5 600 aaKnown RBP11.63□□□□□ -0.55
TROAP-211ENST00000549891 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
TROAP-211ENST00000549891 C17orf100A8MU93 164 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 TPST1O60507 370 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 RP2O75695 350 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 NCR1O76036 304 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 MT-ND5P03915 603 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 EPHA1P21709 976 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 LIMS1P48059 325 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 MRPL19P49406 292 aaKnown RBP11.62□□□□□ -0.55
TROAP-211ENST00000549891 CDH12P55289 794 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 KLF3P57682 345 aaPredicted RBP11.62□□□□□ -0.55
TROAP-211ENST00000549891 HILS1P60008 231 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 LMO4P61968 165 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 SCARB2Q14108 478 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 MOGQ16653 247 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 TMEM53Q6P2H8 277 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 NHLRC1Q6VVB1 395 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 MAVSQ7Z434 540 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 COMTD1Q86VU5 262 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 ARMC8Q8IUR7 673 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 ZNF584Q8IVC4 421 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 SKA3Q8IX90 412 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 OR1J2Q8NGS2 313 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 SYNPRQ8TBG9 265 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 C11orf40Q8WZ69 217 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 RSPO3Q9BXY4 272 aaPredicted RBP11.62□□□□□ -0.55
TROAP-211ENST00000549891 PARD6BQ9BYG5 372 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 LRMDAQ9H2I8 198 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 TMEM38AQ9H6F2 299 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 ZNF665Q9H7R5 613 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 CDH20Q9HBT6 801 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 HINT3Q9NQE9 182 aaKnown RBP11.62□□□□□ -0.55
TROAP-211ENST00000549891 SLCO1C1Q9NYB5 712 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 SLC25A37Q9NYZ2 338 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 TAAR3PQ9P1P4 343 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 GMEB1Q9Y692 573 aa11.62□□□□□ -0.55
TROAP-211ENST00000549891 A0A0G2JMP0 313 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 A0A0X1KG70 313 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 TMEM89A2RUT3 159 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 EVPLLA8MZ36 301 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 C11orf98E9PRG8 122 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 WNT9BO14905 357 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 FMO6PO60774 539 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 VIMP08670 466 aaKnown RBP11.61□□□□□ -0.55
TROAP-211ENST00000549891 ZNF250P15622 560 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 RAD52P43351 418 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 MAGEB1P43366 347 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 RBBP4Q09028 425 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 TBC1D28Q2M2D7 210 aa11.61□□□□□ -0.55
TROAP-211ENST00000549891 SLC36A2Q495M3 483 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms