RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GRB7Q14451 532 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 DUSP7Q16829 419 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 VPS26BQ4G0F5 336 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 NKAIN1Q4KMZ8 207 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SLC8B1Q6J4K2 584 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TMEM53Q6P2H8 277 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SLC25A48Q6ZT89 311 aaKnown RBP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 NUDCD3Q8IVD9 361 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 MICU2Q8IYU8 434 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 OR52H1Q8NGJ2 320 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 GLYATL2Q8WU03 294 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 OR1E3Q8WZA6 343 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 RAPGEF5Q92565 580 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 UFD1Q92890 307 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SEC22AQ96IW7 307 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 PANX2Q96RD6 677 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 P2RY13Q9BPV8 354 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 RACGAP1Q9H0H5 632 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 MRPS30Q9NP92 439 aaKnown RBP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 C20orf96Q9NUD7 363 aaPredicted RBP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 PITPNC1Q9UKF7 332 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 NUP50Q9UKX7 468 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TBC1D24Q9ULP9 559 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TP53TG5Q9Y2B4 290 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 CLSPNQ9HAW4 1339 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 USP47Q96K76 1375 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 NKX2-6A6NCS4 301 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 OR5B21A6NL26 309 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 VSTM2BA6NLU5 285 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 HIP1O00291 1037 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 TRDMT1O14717 391 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 CLOCKO15516 846 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 AKR7A2O43488 359 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PSTPIP1O43586 416 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ERCC1P07992 297 aaPredicted RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RHOXF2BP0C7M4 288 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF24P17028 368 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 CPN2P22792 545 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ANXA13P27216 316 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 IL12AP29459 219 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 CALCRP30988 508 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RRM2P31350 389 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ATP5C1P36542 298 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RPS5P46782 204 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 YAP1P46937 504 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 SLC11A1P49279 550 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 CSNK1EP49674 416 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ETV1P50549 477 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PLK1P53350 603 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PKNOX1P55347 436 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 SLC10A7Q0GE19 358 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 IFT88Q13099 833 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 MADCAM1Q13477 382 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 WDR43Q15061 677 aaKnown RBP eCLIP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 OXA1LQ15070 435 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 TGFBIQ15582 683 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 CARD16Q5EG05 197 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 TTC19Q6DKK2 380 aaPredicted RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 SASS6Q6UVJ0 657 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PGAP1Q75T13 922 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 GDPD3Q7L5L3 318 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 GABRG1Q8N1C3 465 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PQLC3Q8N755 202 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 B3GNT7Q8NFL0 401 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 OR52I1Q8NGK6 324 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 NRGNQ92686 78 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 SGK3Q96BR1 496 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RNF185Q96GF1 192 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 MS4A14Q96JA4 679 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PRRC1Q96M27 445 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 OXGR1Q96P68 337 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RHOXF2Q9BQY4 288 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RIOK1Q9BRS2 568 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 ANKRD60Q9BZ19 345 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 MFFQ9GZY8 342 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RBKSQ9H477 322 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 INPP5EQ9NRR6 644 aa2.15□□□□□ -2.07
CCDC38-208ENST00000549876 MRPL22Q9NWU5 206 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 LYARQ9NX58 379 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PDP1Q9P0J1 537 aaPredicted RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 PACSIN2Q9UNF0 486 aaPredicted RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 RPL36Q9Y3U8 105 aaKnown RBP2.15□□□□□ -2.07
CCDC38-208ENST00000549876 FRMPD3Q5JV73 1810 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLEKHH1Q9ULM0 1364 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 A0A096LNJ9 63 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GFYI3L273 518 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 KIF2AO00139 706 aaPredicted RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 NEMFO60524 1076 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 UGT1A9O60656 530 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OR2J3O76001 311 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OR7A10O76100 309 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OXSR1O95747 527 aaPredicted RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 LGI1O95970 557 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 S100A9P06702 114 aaKnown RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLEKP08567 350 aaPredicted RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PRKACAP17612 351 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GSTM3P21266 225 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 MSR1P21757 451 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms