RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PPIAL4GP0DN37 164 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CALCBP10092 127 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 DBTP11182 482 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ETFAP13804 333 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CDH3P22223 829 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 GCH1P30793 250 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 THBS2P35442 1172 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CSNK2A1P68400 391 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CTF1Q16619 201 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 DUSP7Q16829 419 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 DCAF10Q5QP82 559 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 PODNL1Q6PEZ8 512 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 TBPL2Q6SJ96 375 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 PCSK4Q6UW60 755 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SHFQ7M4L6 423 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 B3GNT8Q7Z7M8 397 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 NFKBIDQ8NI38 313 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 NEIL3Q8TAT5 605 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF582Q96NG8 517 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MIEF1Q9NQG6 463 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 G6PC2Q9NQR9 355 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 IMP3Q9NV31 184 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RASL12Q9NYN1 266 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF224Q9NZL3 707 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CYB5R1Q9UHQ9 305 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 FBXW2Q9UKT8 454 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 AMDHD2Q9Y303 409 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM14AQ9Y6G1 99 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 C17orf105B2RV13 164 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ACOT7O00154 380 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 EI24O14681 340 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 APOC1P02654 83 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SERPINA5P05154 406 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 DCNP07585 359 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RFX3P48380 749 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 EMP2P54851 167 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RPS3AP61247 264 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RPS11P62280 158 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 SYT14P1Q58G82 188 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MRPL2Q5T653 305 aaKnown RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 FBXW12Q6X9E4 464 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-212ENST00000549162 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 NOXO1Q8NFA2 376 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 OR6T1Q8NGN1 323 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 C8orf46Q8TAG6 207 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 GPR151Q8TDV0 419 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 RAB2BQ8WUD1 216 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 PTP4A1Q93096 173 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MYDGFQ969H8 173 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MCUR1Q96AQ8 359 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 NELFAQ9H3P2 528 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 ZFP64Q9NPA5 681 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 CCDC167Q9P0B6 97 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 HCN3Q9P1Z3 774 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 B4GALT7Q9UBV7 327 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 COPS7AQ9UBW8 275 aa4.33□□□□□ -1.72
SCAF11-212ENST00000549162 MEIKINA0A087WXM9 373 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 LOC101059948A0A1B0GTJ6 334 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ISPDA4D126 451 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 FAM171A2A8MVW0 826 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CD40LGP29965 261 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RPL27P61353 136 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 PPP1CAP62136 330 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SNRPD2P62316 118 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OCA2Q04671 838 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 GABRA6Q16445 453 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC25A35Q3KQZ1 300 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 APOOLQ6UXV4 268 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 HSDL2Q6YN16 418 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CATSPERDQ86XM0 798 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CCDC28AQ8IWP9 274 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC26A10Q8NG04 563 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OR8D4Q8NGM9 314 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OR9A4Q8NGU2 314 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OR4Q3Q8NH05 313 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OR10A6Q8NH74 314 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ABHD4Q8TB40 342 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 DYNC2LI1Q8TCX1 351 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 DIRC2Q96SL1 478 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 HPF1Q9NWY4 346 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC39A1Q9NY26 324 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RCC2Q9P258 522 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RSL24D1Q9UHA3 163 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 BOKQ9UMX3 212 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 WDR45Q9Y484 360 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 IGLV3-9A0A075B6K5 115 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 A0A1B0GWA3 101 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 INS-IGF2F8WCM5 200 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC31A1O15431 190 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RDH16O75452 317 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 HEXBP07686 556 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 LYNP07948 512 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SELLP14151 372 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms