RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 KCNK17Q96T54 332 aa18.62■□□□□ 0.57
CACNB3-210ENST00000548874 USP9XQ93008 2570 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-210ENST00000548874 TEX13CA0A0J9YWL9 993 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 NKX2-6A6NCS4 301 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 A6NIZ1 184 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 H3BN98 237 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 IDH3BO43837 385 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 TRMUO75648 421 aaKnown RBP18.61■□□□□ 0.57
CACNB3-210ENST00000548874 IGHV3-9P01782 118 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 IGHG1P01857 330 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 ACVR1BP36896 505 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 RAP1BP61224 184 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 ESRRGP62508 458 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 RAP1AP62834 184 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 SLC34A1Q06495 639 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 TFF3Q07654 80 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 LGALS3BPQ08380 585 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 HIST3H3Q16695 136 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 MESTQ5EB52 335 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 CARD17Q5XLA6 110 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 OR2T33Q8NG76 320 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 HDAC2Q92769 488 aaKnown RBP18.61■□□□□ 0.57
CACNB3-210ENST00000548874 ZNF566Q969W8 418 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 RASD2Q96D21 266 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 NMD3Q96D46 503 aaKnown RBP18.61■□□□□ 0.57
CACNB3-210ENST00000548874 ERMAPQ96PL5 475 aaPredicted RBP18.61■□□□□ 0.57
CACNB3-210ENST00000548874 KCNJ16Q9NPI9 418 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 ENOPH1Q9UHY7 261 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 BAIAP2Q9UQB8 552 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 DOPEY1Q5JWR5 2465 aa18.61■□□□□ 0.57
CACNB3-210ENST00000548874 PEX2P28328 305 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 GIPRP48546 466 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 CSNK1A1P48729 337 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 PCYT1AP49585 367 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 CRISP1P54107 249 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 CDK5Q00535 292 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 KRR1Q13601 381 aaKnown RBP18.6■□□□□ 0.57
CACNB3-210ENST00000548874 PHYHD1Q5SRE7 291 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 OGFRL1Q5TC84 451 aaPredicted RBP18.6■□□□□ 0.57
CACNB3-210ENST00000548874 LPCAT4Q643R3 524 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 LINGO2Q7L985 606 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 NOXO1Q8NFA2 376 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 ALKBH3Q96Q83 286 aaPredicted RBP18.6■□□□□ 0.57
CACNB3-210ENST00000548874 ALG12Q9BV10 488 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 GABARAPL3Q9BY60 117 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 SLC25A19Q9HC21 320 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 GLTPQ9NZD2 209 aa18.6■□□□□ 0.57
CACNB3-210ENST00000548874 HELZ2Q9BYK8 2649 aaKnown RBP18.59■□□□□ 0.57
CACNB3-210ENST00000548874 RPL36A-HNRNPH2H7BZ11 118 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 COX5AP20674 150 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 POU1F1P28069 291 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 PGGHGQ32M88 737 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 SLC27A4Q6P1M0 643 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 ADCK1Q86TW2 530 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 UBE2J2Q8N2K1 259 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 GPR137CQ8N3F9 429 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 IQCF1Q8N6M8 205 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 OR6N1Q8NGY5 312 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 RBM24Q9BX46 236 aaKnown RBP18.59■□□□□ 0.57
CACNB3-210ENST00000548874 C8orf4Q9NR00 106 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 ASB6Q9NWX5 421 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 GALNT8Q9NY28 637 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 ELOVL5Q9NYP7 299 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 UPB1Q9UBR1 384 aa18.59■□□□□ 0.57
CACNB3-210ENST00000548874 M0R3G1 203 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 XKRYO14609 159 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 AHCYL1O43865 530 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 ATP6V1G2O95670 118 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 HIST1H1CP16403 213 aaKnown RBP18.58■□□□□ 0.56
CACNB3-210ENST00000548874 IGHV1-2P23083 117 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 EPHA2P29317 976 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 GRK5P34947 590 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 ZNF133P52736 654 aaPredicted RBP18.58■□□□□ 0.56
CACNB3-210ENST00000548874 FOXG1P55316 489 aaPredicted RBP18.58■□□□□ 0.56
CACNB3-210ENST00000548874 CLRN1P58418 232 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 FAPQ12884 760 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 GINS1Q14691 196 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 P2RY6Q15077 328 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 ZNF362Q5T0B9 420 aaPredicted RBP18.58■□□□□ 0.56
CACNB3-210ENST00000548874 ACSM5Q6NUN0 579 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 LRFN4Q6PJG9 635 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 PTCHD4Q6ZW05 846 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 PACRGLQ8N7B6 248 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 RNASE6Q93091 150 aaKnown RBP18.58■□□□□ 0.56
CACNB3-210ENST00000548874 SNX18Q96RF0 628 aa18.58■□□□□ 0.56
CACNB3-210ENST00000548874 PRSS37A4D1T9 235 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 ZNF587BE7ETH6 402 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 ARHGEF9O43307 516 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 ITGA5P08648 1049 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 NOS3P29474 1203 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 CD79BP40259 229 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 CDKN2AP42771 156 aaKnown RBP18.57■□□□□ 0.56
CACNB3-210ENST00000548874 RAD23AP54725 363 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 MYBPC1Q00872 1141 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 ROR2Q01974 943 aaKnown RBP18.57■□□□□ 0.56
CACNB3-210ENST00000548874 NPRL3Q12980 569 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 PTGES3Q15185 160 aaKnown RBP18.57■□□□□ 0.56
CACNB3-210ENST00000548874 STK11Q15831 433 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 LRRC36Q1X8D7 754 aa18.57■□□□□ 0.56
CACNB3-210ENST00000548874 STAC2Q6ZMT1 411 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms