RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 C1orf61Q13536 156 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 LRRC23Q53EV4 343 aaPredicted RBP2.95□□□□□ -1.94
PTCH1-216ENST00000548379 BOLA3Q53S33 107 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 PAGE2BQ5JRK9 111 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 CFAP157Q5JU67 520 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 MOB3BQ86TA1 216 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 ACOT1Q86TX2 421 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SKA3Q8IX90 412 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SLC38A6Q8IZM9 456 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SVOPLQ8N434 492 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 DHRSXQ8N5I4 330 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 KIR3DL3Q8N743 410 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 CATSPER1Q8NEC5 780 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 OR4D5Q8NGN0 318 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 OR1F12Q8NHA8 337 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 TRMT10AQ8TBZ6 339 aaKnown RBP2.95□□□□□ -1.94
PTCH1-216ENST00000548379 FBXO32Q969P5 355 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 TGM7Q96PF1 710 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF670Q9BS34 389 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 MED10Q9BTT4 135 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 NUP58Q9BVL2 599 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 BBS2Q9BXC9 721 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 CHIAQ9BZP6 476 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 RHBGQ9H310 441 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 Q9H3A6 140 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 GORASP2Q9H8Y8 452 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SMOXQ9NWM0 555 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SMPD3Q9NY59 655 aaPredicted RBP2.95□□□□□ -1.94
PTCH1-216ENST00000548379 RBAKQ9NYW8 714 aaPredicted RBP2.95□□□□□ -1.94
PTCH1-216ENST00000548379 GCNT4Q9P109 453 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 PCSK1NQ9UHG2 260 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 ERVW-1Q9UQF0 538 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 VSIG4Q9Y279 399 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 PPIAL4AQ9Y536 164 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 ALG6Q9Y672 507 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 KIF25-AS1Q9Y6Z4 181 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 DNAH14Q0VDD8 3507 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 ZDBF2Q9HCK1 2354 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 NLRC5Q86WI3 1866 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 NCOR2Q9Y618 2525 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LAMA4Q16363 1823 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ADAMTS9Q9P2N4 1935 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 IGHV1OR15-1A0A075B7D0 117 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF233A6NK53 670 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 A8MXQ7 604 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 F8VP50 259 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 FCN1O00602 326 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ARPC3O15145 178 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 YKT6O15498 198 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 FAM189A1O60320 539 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 TPST2O60704 377 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SNNO75324 88 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LYPLA1O75608 230 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LDOC1O95751 146 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 KRTAP1-4P0C5Y4 121 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 TNNI1P19237 187 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LAP3P28838 519 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 UGT1A3P35503 534 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ATP5C1P36542 298 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LONP1P36776 959 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 PEX19P40855 299 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ARRB1P49407 418 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 UCNP55089 124 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 UBE2HP62256 183 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SEMG2Q02383 582 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 EGFEM1PQ0D2K5 195 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 GANABQ14697 944 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 AANATQ16613 207 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LRRC36Q1X8D7 754 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SLC25A52Q3SY17 297 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 C9orf129Q5T035 196 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF658Q5TYW1 1059 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 LIPNQ5VXI9 398 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF720Q7Z2F6 126 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 BBS7Q8IWZ6 715 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZCCHC7Q8N3Z6 543 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 C11orf42Q8N5U0 333 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 STXBP6Q8NFX7 210 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 OR51G2Q8NGK0 314 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 TUBGCP3Q96CW5 907 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SLC25A38Q96DW6 304 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 COQ2Q96H96 371 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF184Q99676 751 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 GABRG3Q99928 467 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SLC35A5Q9BS91 424 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 TUBGCP2Q9BSJ2 902 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 RNF126Q9BV68 326 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SRXN1Q9BYN0 137 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 FBXO44Q9H4M3 255 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 CLMPQ9H6B4 373 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 ZDHHC4Q9NPG8 344 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 UFSP2Q9NUQ7 469 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 CLEC4EQ9ULY5 219 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 RPH3ALQ9UNE2 315 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 AK6Q9Y3D8 172 aaKnown RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 SLCO1B1Q9Y6L6 691 aa2.94□□□□□ -1.94
PTCH1-216ENST00000548379 PTPRZ1P23471 2315 aaPredicted RBP2.94□□□□□ -1.94
PTCH1-216ENST00000548379 GVINP1Q7Z2Y8 2422 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms