RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TMEM33P57088 247 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 ERVS71-1P61550 626 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 FADDQ13158 208 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 RGS7BPQ6MZT1 257 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 BLOC1S3Q6QNY0 202 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 NET1Q7Z628 596 aaPredicted RBP10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 SKA3Q8IX90 412 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 BBS10Q8TAM1 723 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 ATP6V1G3Q96LB4 118 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 SH3GL3Q99963 347 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 BCL2L10Q9HD36 194 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 A4GALTQ9NPC4 353 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC25A37Q9NYZ2 338 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 CCDC167Q9P0B6 97 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 SLAMF8Q9P0V8 285 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 KLHL14Q9P2G3 628 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 PRDM4Q9UKN5 801 aa10.23□□□□□ -0.77
TRAFD1-205ENST00000548277 PLPP2O43688 288 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 UBL3O95164 117 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 BMP2P12643 396 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 HOXB9P17482 250 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 LSP1P33241 339 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 CSNK1A1P48729 337 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 MRPL19P49406 292 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 NCALDP61601 193 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 RPS23P62266 143 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 GLO1Q04760 184 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 OR1Q1Q15612 314 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 FXNQ16595 210 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 TSTQ16762 297 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 TTMPQ5BVD1 217 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 PAGE3Q5JUK9 113 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 REP15Q6BDI9 236 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ACSM5Q6NUN0 579 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 TMEM154Q6P9G4 183 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ULK3Q6PHR2 472 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 C6orf89Q6UWU4 347 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF584Q8IVC4 421 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 MSRB3Q8IXL7 192 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 PAQR4Q8N4S7 273 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 SGMS2Q8NHU3 365 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 FAM216AQ8WUB2 273 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ZFAND2BQ8WV99 257 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 DNAJA4Q8WW22 397 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 DYDC1Q8WWB3 177 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 GTF3AQ92664 365 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 SPDL1Q96EA4 605 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC47A1Q96FL8 570 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 LRR1Q96L50 414 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC6A7Q99884 636 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 WFDC6Q9BQY6 131 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF416Q9BWM5 594 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF665Q9H7R5 613 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 TMEM27Q9HBJ8 222 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 DOCK11Q5JSL3 2073 aa10.22□□□□□ -0.77
TRAFD1-205ENST00000548277 TRAV20A0A0B4J274 112 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 LOC102725191A0A1B0GVB3 256 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 PLPP3O14495 311 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 RP2O75695 350 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 ANPEPP15144 967 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 AQP1P29972 269 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 RAD52P43351 418 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 RGS8P57771 180 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 HILS1P60008 231 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 PUDPQ08623 228 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 SCGB2A2Q13296 93 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 MELKQ14680 651 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 AGKQ53H12 422 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 LRIF1Q5T3J3 769 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 GCNT6Q5T4J0 391 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 C5orf46Q6UWT4 87 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 WDR88Q6ZMY6 472 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 C10orf111Q8N326 155 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 LSMEM1Q8N8F7 131 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC41A3Q96GZ6 507 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 EPYCQ99645 322 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 RBM4Q9BWF3 364 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 TMPRSS13Q9BYE2 586 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 C12orf10Q9HB07 376 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 CDH20Q9HBT6 801 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC52A3Q9NQ40 469 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 HINT3Q9NQE9 182 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 G6PC2Q9NQR9 355 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 VAPAQ9P0L0 249 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 SLC7A8Q9UHI5 535 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 ZNF346Q9UL40 294 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 PPIAL4AQ9Y536 164 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 PCDHGB1Q9Y5G3 927 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 CACNG2Q9Y698 323 aa10.21□□□□□ -0.77
TRAFD1-205ENST00000548277 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 TPST2O60704 377 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 OR6A2O95222 327 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 BCL10O95999 233 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 SERPINA5P05154 406 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 ARAFP10398 606 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 ETS2P15036 469 aa10.2□□□□□ -0.78
TRAFD1-205ENST00000548277 CCNOP22674 350 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms