RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 IFFO1Q0D2I5 559 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 PHYHD1Q5SRE7 291 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 TMEM53Q6P2H8 277 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 DOK3Q7L591 496 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 MIER2Q8N344 545 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 SIGLECL1Q8N7X8 197 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 GLB1L3Q8NCI6 653 aaPredicted RBP14.42□□□□□ -0.1
VPS29-204ENST00000548259 OR1J2Q8NGS2 313 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 OR6S1Q8NH40 331 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 POP5Q969H6 163 aaKnown RBP14.42□□□□□ -0.1
VPS29-204ENST00000548259 BCL2L14Q9BZR8 327 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 SLITRK2Q9H156 845 aa14.42□□□□□ -0.1
VPS29-204ENST00000548259 IGLV3-9A0A075B6K5 115 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PPIAL4EA0A075B759 164 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 A0A087WUJ7 227 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PPIAL4CA0A0B4J2A2 164 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 ISPDA4D126 451 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PPIAL4DF5H284 164 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 FAM157BP0CG42 384 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 OR8G3PP0DMU2 310 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PPIAL4FP0DN26 164 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 CBLP22681 906 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 ABCE1P61221 599 aaKnown RBP14.41□□□□□ -0.1
VPS29-204ENST00000548259 NCALDP61601 193 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PLP2Q04941 152 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PUDPQ08623 228 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 BAMBIQ13145 260 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 PMS2P3Q13401 168 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 TBC1D28Q2M2D7 210 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 ALG10BQ5I7T1 473 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 OGFOD2Q6N063 350 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 TMEM19Q96HH6 336 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 RNF121Q9H920 327 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 NUP50Q9UKX7 468 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 GPR45Q9Y5Y3 372 aa14.41□□□□□ -0.1
VPS29-204ENST00000548259 MS4A18H0YCH9 400 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 CLPTM1O96005 669 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 FSHBP01225 129 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 IL6P05231 212 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 AHCYP23526 432 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 UFM1P61960 85 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 LCN2P80188 198 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 HOXC5Q00444 222 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 MAPK11Q15759 364 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 MS4A18Q3C1V0 323 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 RPS26P11Q5JNZ5 115 aaPredicted RBP14.4□□□□□ -0.1
VPS29-204ENST00000548259 ULK3Q6PHR2 472 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 UNQ6126/PRO20091Q6UXV3 157 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 PXKQ7Z7A4 578 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 WDFY1Q8IWB7 410 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 SLC22A24Q8N4F4 322 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 C10orf53Q8N6V4 93 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 LSMEM1Q8N8F7 131 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 ICA1LQ8NDH6 482 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.4□□□□□ -0.1
VPS29-204ENST00000548259 CCL17Q92583 94 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 DVL3Q92997 716 aaPredicted RBP14.4□□□□□ -0.1
VPS29-204ENST00000548259 SLC47A1Q96FL8 570 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 NUF2Q9BZD4 464 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 EGLN1Q9GZT9 426 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 RMND5AQ9H871 391 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 AIG1Q9NVV5 245 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 PLEK2Q9NYT0 353 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 UBAP1Q9NZ09 502 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 ZNF224Q9NZL3 707 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 OPN4Q9UHM6 478 aa14.4□□□□□ -0.1
VPS29-204ENST00000548259 IQCMA0A1B0GVH7 501 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 A0A1B0GWA3 101 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 PLSCR5A0PG75 271 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 DNAJC9-AS1A6NH13 148 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 C5orf58C9J3I9 102 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 ITM2AO43736 263 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 OR6A2O95222 327 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 SNAP29O95721 258 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 ZCCHC18P0CG32 403 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 HLA-DOBP13765 273 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 ZNF81P51508 661 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 SLC36A2Q495M3 483 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 FAM91A1Q658Y4 838 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 ZNF584Q8IVC4 421 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 BBS10Q8TAM1 723 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 LRRC58Q96CX6 371 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
VPS29-204ENST00000548259 SLC41A3Q96GZ6 507 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 TXNDC15Q96J42 360 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 TEX37Q96LM6 180 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 MRI1Q9BV20 369 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 OR51B6Q9H340 312 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 RAD21L1Q9H4I0 556 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 TPT1P8Q9HAU6 139 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 MRPL39Q9NYK5 338 aaKnown RBP14.39□□□□□ -0.11
VPS29-204ENST00000548259 LGALS13Q9UHV8 139 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 TRRAPQ9Y4A5 3859 aa14.39□□□□□ -0.11
VPS29-204ENST00000548259 BIRC5O15392 142 aa14.38□□□□□ -0.11
VPS29-204ENST00000548259 SERPINI2O75830 405 aa14.38□□□□□ -0.11
VPS29-204ENST00000548259 HPRP00739 348 aa14.38□□□□□ -0.11
VPS29-204ENST00000548259 RNASE1P07998 156 aaKnown RBP14.38□□□□□ -0.11
VPS29-204ENST00000548259 MTNR1AP48039 350 aa14.38□□□□□ -0.11
VPS29-204ENST00000548259 UCP2P55851 309 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms