RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TCRBV5S2A0A599 114 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 MCIDASD6RGH6 385 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 CDC42EP2O14613 210 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 IGHG1P01857 330 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 SLC9A3P48764 834 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 SPOCK1Q08629 439 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 SEC23BQ15437 767 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 MTX3Q5HYI7 312 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 ARMC4Q5T2S8 1044 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 LCN8Q6JVE9 175 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 LRFN4Q6PJG9 635 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 DHFR2Q86XF0 187 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 LRRC75AQ8NAA5 344 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 OR13C2Q8NGS9 318 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 PIGTQ969N2 578 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 RADILQ96JH8 1075 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 FUZQ9BT04 418 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 THTPAQ9BU02 230 aa16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 BEX4Q9NWD9 120 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-206ENST00000547764 SMIM11AP58511 58 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 SPIBQ01892 262 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 ANKDD1AQ495B1 522 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 SLC22A25Q6T423 547 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF813Q6ZN06 617 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF627Q7L945 461 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 OR4K5Q8NGD3 323 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 IGFBPL1Q8WX77 278 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 FBXW5Q969U6 566 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 FAM46AQ96IP4 442 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 SEPHS2Q99611 448 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 FOXB1Q99853 325 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 MRPL13Q9BYD1 178 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 TXNIPQ9H3M7 391 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 CISD1Q9NZ45 108 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 TMEM5Q9Y2B1 443 aa16.34■□□□□ 0.21
PRPF40B-206ENST00000547764 HEATR1Q9H583 2144 aaKnown RBP16.33■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF503-AS2A6NEH8 195 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 NPIPB13A6NJU9 1138 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 NPIPB4C9JG80 1138 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 TRMUO75648 421 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 GADD45GO95257 159 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 QDPRP09417 244 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 B4GALT1P15291 398 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 ACADSP16219 412 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 PAX7P23759 505 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 OMPP47874 163 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 CDH11P55287 796 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 CLRN1P58418 232 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 CTXN1P60606 82 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 HIST3H3Q16695 136 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 ZBED5Q49AG3 693 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 SPNS3Q6ZMD2 512 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 PIWIL3Q7Z3Z3 882 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 HDDC2Q7Z4H3 204 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 IGFN1Q86VF2 1251 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 SYT14Q8NB59 555 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 NOXO1Q8NFA2 376 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 CCDC124Q96CT7 223 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 SLC7A6OSQ96CW6 309 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 ASB9Q96DX5 294 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF347Q96SE7 839 aa16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 CRNNQ9UBG3 495 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-206ENST00000547764 IGHV1-18A0A0C4DH31 117 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 SH3PXD2BA1X283 911 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 CENPBD1B2RD01 187 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 GYG2O15488 501 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 DHHO43323 396 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 IGHMP01871 453 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 DANCRP0C864 163 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF26P17031 533 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 RRM2P31350 389 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 CAPZA2P47755 286 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 LIMS1P48059 325 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 RPL27P61353 136 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 MYBPC1Q00872 1141 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 TOP3AQ13472 1001 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 TAF11Q15544 211 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 LURAP1LQ8IV03 231 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 CCDC36Q8IYA8 594 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 DEPDC4Q8N2C3 294 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 FAM169BQ8N8A8 192 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 SMAP2Q8WU79 429 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 HDAC2Q92769 488 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 MCHR2Q969V1 340 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 SLC38A2Q96QD8 506 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 STX18Q9P2W9 335 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 POU2F3Q9UKI9 436 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF346Q9UL40 294 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 LAMP3Q9UQV4 416 aa16.32■□□□□ 0.2
PRPF40B-206ENST00000547764 E7EQL1 145 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 ACOT8O14734 319 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 SMPD2O60906 423 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 PTP4A3O75365 173 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 IGKV3-15P01624 115 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 IGLV1-44P01699 117 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 HLA-HP01893 362 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 SOD3P08294 240 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 CBR1P16152 277 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms