RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SPAM1P38567 509 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 VHLP40337 213 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 NSG1P42857 185 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CCNHP51946 323 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 HNRNPA3P51991 378 aaKnown RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 LIM2P55344 173 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CLDN18P56856 261 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TNNC1P63316 161 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 MRPS11P82912 194 aaKnown RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CHRNB3Q05901 458 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 ZFP36L1Q07352 338 aaKnown RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 DPYSL3Q14195 570 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 GPR176Q14439 515 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 KCNJ11Q14654 390 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 USF2Q15853 346 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF876PQ49A33 203 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SLC22A6Q4U2R8 563 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CARD16Q5EG05 197 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 METTL11BQ5VVY1 283 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SLC25A48Q6ZT89 311 aaKnown RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 FRA10AC1Q70Z53 315 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 NRMQ8IXM6 262 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 ST13P4Q8IZP2 240 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CMTM8Q8IZV2 173 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 IQCKQ8N0W5 287 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 MS4A15Q8N5U1 240 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CSNK1A1LQ8N752 337 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 GATSQ8NAP1 163 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 OR51L1Q8NGJ5 315 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 FLVCR1-AS1Q8TAF5 88 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 NDNFQ8TB73 568 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SUN5Q8TC36 379 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 PYROXD1Q8WU10 500 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 GTF3AQ92664 365 aaKnown RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TOP1MTQ969P6 601 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 PSMG2Q969U7 264 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 HSFY1Q96LI6 401 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 MCHR1Q99705 422 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TMEM175Q9BSA9 504 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TM2D1Q9BX74 207 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SLC7A5P2Q9GIP4 190 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 RANBP3Q9H6Z4 567 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CAB39LQ9H9S4 337 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TMEM165Q9HC07 324 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 UXTQ9UBK9 157 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 PRODH2Q9UF12 536 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 STAP1Q9ULZ2 295 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 ERVW-1Q9UQF0 538 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 PLLPQ9Y342 182 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SAR1BQ9Y6B6 198 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 KIAA1107Q9UPP5 1409 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 FMN2Q9NZ56 1722 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 DHX57Q6P158 1386 aaKnown RBP3.41□□□□□ -1.86
SCAF11-210ENST00000547654 PLEKHG1Q9ULL1 1385 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 A0A1W2PRD5 423 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 A8MUA0 341 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 MPTX1A8MV57 137 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 SIVA1O15304 175 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 E2F6O75461 281 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 FCN3O75636 299 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 TSPAN13O95857 204 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 PATE4P0C8F1 98 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 SLC2A5P22732 501 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 FASP25445 335 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GPR4P46093 362 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 ALDH3B2P48448 385 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 PLK1P53350 603 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GSCP56915 257 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-210ENST00000547654 TLE4Q04727 773 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CDH17Q12864 832 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 SF3A2Q15428 464 aaKnown RBP3.41□□□□□ -1.86
SCAF11-210ENST00000547654 SIX1Q15475 284 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GPR157Q5UAW9 335 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GPR107Q5VW38 600 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 STUMQ69YW2 141 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CERS6Q6ZMG9 384 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF836Q6ZNA1 936 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 PLA2G4DQ86XP0 818 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GPR65Q8IYL9 337 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 LIX1Q8N485 282 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 C8orf31Q8N9H6 132 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 FNDC5Q8NAU1 212 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 FAM76AQ8TAV0 307 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CAPSLQ8WWF8 208 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 GLT1D1Q96MS3 346 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 OPALINQ96PE5 141 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 KCNA7Q96RP8 456 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 TBX15Q96SF7 602 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 ATF6BQ99941 703 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 MFFQ9GZY8 342 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 OPN3Q9H1Y3 402 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-210ENST00000547654 OR2AG1Q9H205 316 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 SPACA1Q9HBV2 294 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF446Q9NWS9 450 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 CD300AQ9UGN4 299 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 RIMS3Q9UJD0 308 aa3.41□□□□□ -1.86
SCAF11-210ENST00000547654 LSM7Q9UK45 103 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms