RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CYBRD1Q53TN4 286 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 VHLLQ6RSH7 139 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 DEF8Q6ZN54 512 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 NANOGNBQ7Z5D8 188 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 NKAIN4Q8IVV8 208 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 MICU2Q8IYU8 434 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 LIPHQ8WWY8 451 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 ZNF75AQ96N20 296 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 SORCS2Q96PQ0 1159 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 MYOZ1Q9NP98 299 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 ARMCX1Q9P291 453 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 FBXL3Q9UKT7 428 aa16.15■□□□□ 0.18
CHMP1A-203ENST00000547614 ELOVL7A1L3X0 281 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 HTR3EA5X5Y0 456 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 BLOC1S5-TXNDC5H3BN57 136 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 NDUFS8O00217 210 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 CCDC22O60826 627 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 BCL10O95999 233 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 ZNF14P17017 642 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 FUT1P19526 365 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 THBS4P35443 961 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 OR1E2P47887 323 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 PPOXP50336 477 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 RAB1AP62820 205 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 SELENOWP63302 87 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 PIN1Q13526 163 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 LRFN4Q6PJG9 635 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 PRIMA1Q86XR5 153 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 TMEM255BQ8WV15 326 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 TMEM239Q8WW34 195 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 RCN3Q96D15 328 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 VRK1Q99986 396 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 NOX3Q9HBY0 568 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 ZNF224Q9NZL3 707 aa16.14■□□□□ 0.17
CHMP1A-203ENST00000547614 CENPBD1B2RD01 187 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 GPRIN2O60269 458 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 OR7A10O76100 309 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 UBL3O95164 117 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 PGA4P0DJD7 388 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 PGA3P0DJD8 388 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 ZNF35P13682 527 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 NR4A1P22736 598 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 PDLIM4P50479 330 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 UGT2B15P54855 530 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 VLDLRP98155 873 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 PIGFQ07326 219 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 DAG1Q14118 895 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 TMEM249Q2WGJ8 235 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 LRRC23Q53EV4 343 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 HDDC2Q7Z4H3 204 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 SLC15A3Q8IY34 581 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 POU5F2Q8N7G0 328 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 LZICQ8WZA0 190 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 SGTBQ96EQ0 304 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 DOK1Q99704 481 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 RAB1BQ9H0U4 201 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 CMTM6Q9NX76 183 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 MED31Q9Y3C7 131 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 SPEF1Q9Y4P9 236 aa16.13■□□□□ 0.17
CHMP1A-203ENST00000547614 LOC390937A0A1W2PQ73 354 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 A0A1W2PRG6 482 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 hCG_2039718K7EN88 272 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 DHHO43323 396 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 SHOX2O60902 331 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 LY6HO94772 140 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 RAB36O95755 333 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 IGHG1P01857 330 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 TSPAN19P0C672 248 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 OR8G3PP0DMU2 310 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 COX4I1P13073 169 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 IFNA8P32881 189 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 GIPRP48546 466 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 PTDSS1P48651 473 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 RPL18Q07020 188 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 ST3GAL3Q11203 375 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 SNTB2Q13425 540 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 MELKQ14680 651 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 HIST3H3Q16695 136 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 NRN1LQ496H8 165 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 DPPA2Q7Z7J5 298 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 SKA3Q8IX90 412 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 SLC22A24Q8N4F4 322 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 PFN4Q8NHR9 129 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 MS4A3Q96HJ5 214 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 TPD52L3Q96J77 140 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 SEPHS2Q99611 448 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 HOPXQ9BPY8 73 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 MRPL13Q9BYD1 178 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 YAE1D1Q9NRH1 226 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 C20orf141Q9NUB4 165 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 CMAHPQ9Y471 501 aa16.12■□□□□ 0.17
CHMP1A-203ENST00000547614 CHD3Q12873 2000 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 TMEM129A0AVI4 362 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 A8MV72 311 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 VWC2LB2RUY7 222 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 MGRN1O60291 552 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 FARS2O95363 451 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 QDPRP09417 244 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 USF1P22415 310 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 EVX1P49640 407 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms