RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF385AQ96PM9 386 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 OR2M2Q96R28 347 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 KCNK17Q96T54 332 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 EMC6Q9BV81 110 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 MRPL13Q9BYD1 178 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 YTHDF1Q9BYJ9 559 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 BLOC1S6Q9UL45 172 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 GPR52Q9Y2T5 361 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 EMC9Q9Y3B6 208 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 ZZEF1O43149 2961 aa14.07□□□□□ -0.16
TRAFD1-203ENST00000547063 LAMA5O15230 3695 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 KDM4EB2RXH2 506 aaPredicted RBP14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 M0R129 80 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 PRODHO43272 600 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 SS18L1O75177 396 aaPredicted RBP14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNF432O94892 652 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 SLC2A10O95528 541 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 IL2RAP01589 272 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 PGA4P0DJD7 388 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 PGA3P0DJD8 388 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 TIMP3P35625 211 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 CSNK1A1P48729 337 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 BLVRAP53004 296 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 PER3P56645 1201 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 CAMK2DQ13557 499 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 SLC35D3Q5M8T2 416 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 C6orf141Q5SZD1 244 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 PLBD1Q6P4A8 553 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 RPTNQ6XPR3 784 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 TUSC5Q8IXB3 177 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 CYB561A3Q8NBI2 242 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 OR6N1Q8NGY5 312 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 CNIH3Q8TBE1 160 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 UBE2FQ969M7 185 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 NMNAT2Q9BZQ4 307 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 HINT3Q9NQE9 182 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 ASB6Q9NWX5 421 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 SCN3BQ9NY72 215 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 ING1Q9UK53 422 aaPredicted RBP14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 MOKQ9UQ07 419 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 RPL36Q9Y3U8 105 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 FKBP7Q9Y680 259 aa14.06□□□□□ -0.16
TRAFD1-203ENST00000547063 ITPR1Q14643 2758 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ATRXP46100 2492 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ATMQ13315 3056 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 SLC22A23A1A5C7 686 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 OR6C68A6NDL8 312 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 SLC22A31A6NKX4 558 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNHIT1O43257 154 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 WBP4O75554 376 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 CCDC159P0C7I6 412 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 AGTR1P30556 359 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 RBM48Q5RL73 367 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 LCN1P1Q5VSP4 162 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 AADACL4Q5VUY2 407 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 TMEM211Q6ICI0 200 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 FAM214BQ7L5A3 538 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 DOLPP1Q86YN1 238 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 TMEM123Q8N131 208 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 POMGNT2Q8NAT1 580 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 PTP4A1Q93096 173 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 APH1AQ96BI3 265 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNF582Q96NG8 517 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 NR1H4Q96RI1 486 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 DDOQ99489 341 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 SYT4Q9H2B2 425 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 RPRD1BQ9NQG5 326 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 PLCXD1Q9NUJ7 323 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 UBAP1Q9NZ09 502 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 DNAJC27Q9NZQ0 273 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 WARS2Q9UGM6 360 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 FAM215AQ9Y5M1 114 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ZGRF1Q86YA3 2104 aa14.05□□□□□ -0.16
TRAFD1-203ENST00000547063 ARHGAP21Q5T5U3 1957 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 IRGMA1A4Y4 181 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 FAM183AA6NL82 134 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 ENTPD6O75354 484 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 KHDRBS3O75525 346 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 SPI1P17947 270 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 HTR1FP30939 366 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 CDH11P55287 796 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 RPS7P62081 194 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 HIST3H3Q16695 136 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 KLHL12Q53G59 568 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 RIPPLY2Q5TAB7 128 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 CARD17Q5XLA6 110 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 RTL6Q6ICC9 239 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 MEPCEQ7L2J0 689 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 ABHD12BQ7Z5M8 362 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 C20orf196Q8IYI0 205 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNF786Q8N393 782 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 GPR137CQ8N3F9 429 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 C9orf106Q8NAJ2 232 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 SYT14Q8NB59 555 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 APH1BQ8WW43 257 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 TMEM54Q969K7 222 aa14.04□□□□□ -0.16
TRAFD1-203ENST00000547063 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms