RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FXYD6P3P58550 94 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 RAP1BP61224 184 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 RAP1AP62834 184 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 PPA1Q15181 289 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 RFX4Q33E94 735 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 BEX5Q5H9J7 111 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 SMARCD3Q6STE5 483 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 SEZ6L2Q6UXD5 910 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 CD300LDQ6UXZ3 194 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 DPY19L2P2Q6ZN68 376 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 ARIH2OSQ8N7S6 290 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 ZNF519Q8TB69 540 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 BCL2L2Q92843 193 aaPredicted RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 ALKBH3Q96Q83 286 aaPredicted RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 KCNK17Q96T54 332 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 ALG12Q9BV10 488 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 SMURF2Q9HAU4 748 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 MOV10Q9HCE1 1003 aaKnown RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 VNN3Q9NY84 501 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 MGAT4BQ9UQ53 548 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 AMDHD2Q9Y303 409 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 M0R3G1 203 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 GNGT2O14610 69 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 IMPA2O14732 288 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 ARPC3O15145 178 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 TRMUO75648 421 aaKnown RBP12.69□□□□□ -0.38
DDX54-203ENST00000546869 TXNDC12O95881 172 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 GASTP01350 101 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 GSTM3P21266 225 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 NR1H2P55055 460 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 ACTR3P61158 418 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 ARF1P84077 181 aaKnown RBP12.69□□□□□ -0.38
DDX54-203ENST00000546869 COX10Q12887 443 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 CCNIQ14094 377 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 MELKQ14680 651 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 NRN1LQ496H8 165 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 THEM4Q5T1C6 240 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 GPR139Q6DWJ6 353 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 FAM122BQ7Z309 247 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 C10orf67Q8IYJ2 551 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 FAM169BQ8N8A8 192 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 WDR31Q8NA23 367 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 NMD3Q96D46 503 aaKnown RBP12.69□□□□□ -0.38
DDX54-203ENST00000546869 NRBF2Q96F24 287 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 ULBP2Q9BZM5 246 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 IL20Q9NYY1 176 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 AP4S1Q9Y587 144 aa12.69□□□□□ -0.38
DDX54-203ENST00000546869 MAGED1Q9Y5V3 778 aaPredicted RBP12.69□□□□□ -0.38
DDX54-203ENST00000546869 SETXQ7Z333 2677 aaKnown RBP12.69□□□□□ -0.38
DDX54-203ENST00000546869 SIAH2O43255 324 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 DHHO43323 396 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 IDH3BO43837 385 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 ENTPD5O75356 428 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 DEAF1O75398 565 aaPredicted RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 WNT11O96014 354 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 LOXP28300 417 aaPredicted RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 HOXC12P31275 282 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 RPL4P36578 427 aaKnown RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 ACVR1BP36896 505 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 CLRN1P58418 232 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 RUNX1T1Q06455 604 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 GABPB1Q06547 395 aaPredicted RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 TBRG1Q3YBR2 411 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 C10orf128Q5T292 105 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 C9orf135Q5VTT2 229 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 GIPC3Q8TF64 312 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 HDAC2Q92769 488 aaKnown RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 MCHR2Q969V1 340 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 ZNF837Q96EG3 531 aaPredicted RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 RBP7Q96R05 134 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 POLDIP3Q9BY77 421 aaKnown RBP12.68□□□□□ -0.38
DDX54-203ENST00000546869 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 GRHPRQ9UBQ7 328 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 U3KQV3 271 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 CENPEQ02224 2701 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 CELSR2Q9HCU4 2923 aa12.68□□□□□ -0.38
DDX54-203ENST00000546869 NBPF19A0A087WUL8 3843 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 QDPRP09417 244 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 SDHAP31040 664 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 SLC6A6P31641 620 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 ARHGDIAP52565 204 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 ERVK-25P63136 954 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms