RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SYT14Q8NB59 555 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 MAGEE2Q8TD90 523 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-217ENST00000545738 SSC4DQ8WTU2 575 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 ASB5Q8WWX0 329 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 NMD3Q96D46 503 aaKnown RBP14.36□□□□□ -0.11
LIMS2-217ENST00000545738 KCNK17Q96T54 332 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 TACO1Q9BSH4 297 aaKnown RBP14.36□□□□□ -0.11
LIMS2-217ENST00000545738 IFT27Q9BW83 186 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 TSSK6Q9BXA6 273 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 SLCO5A1Q9H2Y9 848 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 KRT84Q9NSB2 600 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 TBC1D23Q9NUY8 699 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 H3BN98 237 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 CASQ2O14958 399 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 CLDN14O95500 239 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SLC2A10O95528 541 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ITGA5P08648 1049 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 HIST1H1CP16403 213 aaKnown RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 AGAP20933 346 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 IGFBP5P24593 272 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 POU1F1P28069 291 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SDHAP31040 664 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SLC6A6P31641 620 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ACVR1BP36896 505 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 CDKN2AP42771 156 aaKnown RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 MYBPC1Q00872 1141 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 HIST3H3Q16695 136 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SLC35F1Q5T1Q4 408 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 C9orf135Q5VTT2 229 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 FBXW9Q5XUX1 488 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 LRFN4Q6PJG9 635 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 XKRXQ6PP77 449 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ARIH2OSQ8N7S6 290 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 EME1Q96AY2 570 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SLC25A44Q96H78 314 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ERMAPQ96PL5 475 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 PIGMQ9H3S5 423 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 USE1Q9NZ43 259 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 POFUT2Q9Y2G5 429 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 M0R3G1 203 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 CLDN1O95832 211 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 TXNDC12O95881 172 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ACADSP16219 412 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ALDH3A2P51648 485 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 FAPQ12884 760 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 SLC25A35Q3KQZ1 300 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 OGFRL1Q5TC84 451 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 Q6ZT83 130 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 LNX2Q8N448 690 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 NOXO1Q8NFA2 376 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 HTRA1Q92743 480 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 TMEM54Q969K7 222 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF570Q96NI8 536 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 RBM4BQ9BQ04 359 aaKnown RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 RBM4Q9BWF3 364 aaKnown RBP14.35□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF556Q9HAH1 456 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 PARPBPQ9NWS1 579 aa14.35□□□□□ -0.11
LIMS2-217ENST00000545738 PTPN13Q12923 2485 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ANKHD1Q8IWZ3 2542 aaKnown RBP14.34□□□□□ -0.11
LIMS2-217ENST00000545738 E9PQ18 207 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 M0R129 80 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 DCTN6O00399 190 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ARPC3O15145 178 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ATP6V1G2O95670 118 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 COX5AP20674 150 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 CDK5Q00535 292 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 KRR1Q13601 381 aaKnown RBP14.34□□□□□ -0.11
LIMS2-217ENST00000545738 FBXL19-AS1Q494R0 122 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 STAC2Q6ZMT1 411 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ZBTB49Q6ZSB9 765 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 CXorf67Q86X51 503 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-217ENST00000545738 UBE2J2Q8N2K1 259 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 OR4K13Q8NH42 304 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF566Q969W8 418 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ADAD1Q96M93 576 aaKnown RBP14.34□□□□□ -0.11
LIMS2-217ENST00000545738 MBOAT4Q96T53 435 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 NMNAT3Q96T66 252 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 DDOQ99489 341 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 C9orf16Q9BUW7 83 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 RBM24Q9BX46 236 aaKnown RBP14.34□□□□□ -0.11
LIMS2-217ENST00000545738 GRHPRQ9UBQ7 328 aa14.34□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF726A6NNF4 738 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 ARHGEF9O43307 516 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 SLC43A1O75387 559 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 LYZL6O75951 148 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 SNAP29O95721 258 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 APEHP13798 732 aaKnown RBP14.33□□□□□ -0.12
LIMS2-217ENST00000545738 GIPRP48546 466 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 ASCL1P50553 236 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 CRISP1P54107 249 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 SLC34A1Q06495 639 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 GINS1Q14691 196 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 PTGES3Q15185 160 aaKnown RBP14.33□□□□□ -0.12
LIMS2-217ENST00000545738 ETFDHQ16134 617 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 PGGHGQ32M88 737 aa14.33□□□□□ -0.12
LIMS2-217ENST00000545738 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-217ENST00000545738 RPL13AP3Q6NVV1 102 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms