RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TROVE2P10155 538 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCARB1-210ENST00000545493 ARFIP2P53365 341 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 PIGFQ07326 219 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 DAG1Q14118 895 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 CXXC5Q7LFL8 322 aaKnown RBP18.24■□□□□ 0.51
SCARB1-210ENST00000545493 SNX32Q86XE0 403 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 ZCCHC24Q8N2G6 241 aaKnown RBP18.24■□□□□ 0.51
SCARB1-210ENST00000545493 PFN4Q8NHR9 129 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 DOK1Q99704 481 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 COL6A5A8TX70 2615 aa18.24■□□□□ 0.51
SCARB1-210ENST00000545493 PGA4P0DJD7 388 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 PGA3P0DJD8 388 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF35P13682 527 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 GIPRP48546 466 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 PTDSS1P48651 473 aaKnown RBP18.23■□□□□ 0.51
SCARB1-210ENST00000545493 LSM11P83369 360 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCARB1-210ENST00000545493 CARTPTQ16568 116 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 CHRFAM7AQ494W8 412 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 NANOGNBQ7Z5D8 188 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF584Q8IVC4 421 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 NKAIN4Q8IVV8 208 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 IL17RDQ8NFM7 739 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 FGFBP3Q8TAT2 258 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF583Q96ND8 569 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 BPESC1Q9GZL8 116 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF446Q9NWS9 450 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 GLTPQ9NZD2 209 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 SH3GLB1Q9Y371 365 aa18.23■□□□□ 0.51
SCARB1-210ENST00000545493 LOC390937A0A1W2PQ73 354 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 FAM220BPB1ANY3 271 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 SHOX2O60902 331 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-210ENST00000545493 UBL3O95164 117 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 RAB36O95755 333 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 UMPSP11172 480 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 NR4A1P22736 598 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 MMEL1Q495T6 779 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 DEF8Q6ZN54 512 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 TMEM255BQ8WV15 326 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 ZNF566Q969W8 418 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 SH3GL1Q99961 368 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 ECSITQ9BQ95 431 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 MRPL37Q9BZE1 423 aaKnown RBP18.22■□□□□ 0.51
SCARB1-210ENST00000545493 C20orf141Q9NUB4 165 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 TMEM160Q9NX00 188 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 MALRD1Q5VYJ5 2156 aa18.22■□□□□ 0.51
SCARB1-210ENST00000545493 OR5F1O95221 314 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 MT-ND1P03886 318 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 PATE4P0C8F1 98 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 TAS2R41P59536 307 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 RAB1AP62820 205 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 RUNX1T1Q06455 604 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 RPL18Q07020 188 aaKnown RBP18.21■□□□□ 0.51
SCARB1-210ENST00000545493 MAPRE2Q15555 327 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 CYB5R2Q6BCY4 276 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 ERICH5Q6P6B1 374 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 LRFN4Q6PJG9 635 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 SKA3Q8IX90 412 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 MRPL24Q96A35 216 aaKnown RBP18.21■□□□□ 0.51
SCARB1-210ENST00000545493 SLC25A44Q96H78 314 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-210ENST00000545493 FOXN4Q96NZ1 517 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 RAB1BQ9H0U4 201 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 DYNLRB1Q9NP97 96 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 MRGBPQ9NV56 204 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 TMEM38BQ9NVV0 291 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 FBXO9Q9UK97 447 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-210ENST00000545493 BAG5Q9UL15 447 aa18.21■□□□□ 0.51
SCARB1-210ENST00000545493 NPPAP01160 153 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 IGFBP5P24593 272 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 RBM34P42696 430 aaKnown RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 OR1E2P47887 323 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 PIN1Q13526 163 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 RAB39AQ14964 217 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 LRRC23Q53EV4 343 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 SLC22A24Q8N4F4 322 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 NOXO1Q8NFA2 376 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 C10orf82Q8WW14 230 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 POLR2J2Q9GZM3 115 aaKnown RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 POLR2J3Q9H1A7 115 aaKnown RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 DENND2DQ9H6A0 471 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 GMPR2Q9P2T1 348 aaKnown RBP18.2■□□□□ 0.5
SCARB1-210ENST00000545493 CDC42EP3Q9UKI2 254 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 CMAHPQ9Y471 501 aa18.2■□□□□ 0.5
SCARB1-210ENST00000545493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.2■□□□□ 0.59e-30■■■■□ 19.7
SCARB1-210ENST00000545493 DHHO43323 396 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 OR7A10O76100 309 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 STAMBPO95630 424 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 IGHG1P01857 330 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 DAOP14920 347 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 GZMKP49863 264 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 FXNQ16595 210 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 CYBRD1Q53TN4 286 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 PIWIL3Q7Z3Z3 882 aaKnown RBP18.19■□□□□ 0.5
SCARB1-210ENST00000545493 TMEM239Q8WW34 195 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 NEU4Q8WWR8 484 aaPredicted RBP18.19■□□□□ 0.5
SCARB1-210ENST00000545493 ASB10Q8WXI3 467 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 MSI2Q96DH6 328 aaKnown RBP18.19■□□□□ 0.5
SCARB1-210ENST00000545493 ZNF347Q96SE7 839 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 KCNK17Q96T54 332 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 SEPHS2Q99611 448 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 SOX7Q9BT81 388 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms