RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PROX1Q92786 737 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 LRRC39Q96DD0 335 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 GMPPAQ96IJ6 420 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-222ENST00000544585 COL21A1Q96P44 957 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 NTMT1Q9BV86 223 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 PINK1Q9BXM7 581 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 C1orf21Q9H246 121 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 SLA2Q9H6Q3 261 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 PTGES2Q9H7Z7 377 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 PLAC1Q9HBJ0 212 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 CDH20Q9HBT6 801 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 NOX4Q9NPH5 578 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 AHSPQ9NZD4 102 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 ZNF337Q9Y3M9 751 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 RNF115Q9Y4L5 304 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 AP4B1Q9Y6B7 739 aa5.31□□□□□ -1.56
CPSF7-222ENST00000544585 A0A0A6YYD5 115 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 C13orf42A0A1B0GVH6 325 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 A0A1W2PP11 408 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 ELOVL7A1L3X0 281 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 DUXAA6NLW8 204 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 FOXE1O00358 373 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 UBFD1O14562 309 aaKnown RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 DVL1O14640 695 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CLOCKO15516 846 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 FCGR3BO75015 233 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 PRKRAO75569 313 aaKnown RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 PLGP00747 810 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CCDC166P0CW27 439 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 LBPP18428 481 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 EPORP19235 508 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CSNK2A2P19784 350 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 C21orf33P30042 268 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CASP9P55211 416 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CLDN15P56746 228 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 B3GALT5-AS1P59052 145 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 GANABQ14697 944 aaKnown RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 RAB35Q15286 201 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 HFEQ30201 348 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 ZNF672Q499Z4 452 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 LBHQ53QV2 105 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 AGAP6Q5VW22 663 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 OR5M10Q6IEU7 315 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 BHLHB9Q6PI77 547 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 CLEC2AQ6UVW9 174 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 C12orf54Q6X4T0 127 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 NRARPQ7Z6K4 114 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 NUDT13Q86X67 352 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 PDIK1LQ8N165 341 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 FNDC9Q8TBE3 224 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 RAB3IL1Q8TBN0 382 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 STAG3L4Q8TBR4 150 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 SSMEM1Q8WWF3 244 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 NAP1L3Q99457 506 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 TRAF4Q9BUZ4 470 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 PLA2G12AQ9BZM1 189 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 ACTR6Q9GZN1 396 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 DDX47Q9H0S4 455 aaKnown RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 SRD5A3Q9H8P0 318 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 OPTCQ9UBM4 332 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 ZNF639Q9UID6 485 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 DMRT1Q9Y5R6 373 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 RAI1Q7Z5J4 1906 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-222ENST00000544585 PKD1L1Q8TDX9 2849 aa5.3□□□□□ -1.56
CPSF7-222ENST00000544585 FREM1Q5H8C1 2179 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 IGHV4-30-2A0A087WSY4 118 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 RNF103-CHMP3A0A140T963 221 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 RPS10-NUDT3A0A1W2PQS6 291 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 C15orf62A8K5M9 175 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 H0YIV9 168 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 K7EPI3 171 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 EEDO75530 441 aaKnown RBP5.29□□□□□ -1.56
CPSF7-222ENST00000544585 CD8AP01732 235 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 IGHV2-70P01814 119 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 LCATP04180 440 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 ATP1B1P05026 303 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 CSN3P07498 182 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 PABPC4LP0CB38 370 aaKnown RBP5.29□□□□□ -1.56
CPSF7-222ENST00000544585 CD1DP15813 335 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 HNF1AP20823 631 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 ELK3P41970 407 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 DDX39BQ13838 428 aaKnown RBP5.29□□□□□ -1.56
CPSF7-222ENST00000544585 CTU2Q2VPK5 515 aaKnown RBP5.29□□□□□ -1.56
CPSF7-222ENST00000544585 PGGHGQ32M88 737 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 FBXO48Q5FWF7 155 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 PDSS1Q5T2R2 415 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 RAET1LQ5VY80 246 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 FAM166AQ6J272 317 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 TTC27Q6P3X3 843 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 NHLRC1Q6VVB1 395 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 PAGE2Q7Z2X7 111 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 PIGWQ7Z7B1 504 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 COMMD2Q86X83 199 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 RFLNBQ8N5W9 214 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 TRIM58Q8NG06 486 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 OR52B6Q8NGF0 335 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 OR52I2Q8NH67 350 aa5.29□□□□□ -1.56
CPSF7-222ENST00000544585 SGMS2Q8NHU3 365 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms