RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 CAMK2DQ13557 499 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 WDR38Q5JTN6 314 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 LRRC28Q86X40 367 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TOR1AIP2Q8NFQ8 470 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR1N1Q8NGS0 311 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TRIM63Q969Q1 353 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 UBL7Q96S82 380 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 KCNJ15Q99712 375 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 MN1Q10571 1320 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 COL6A3P12111 3177 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FAM157BP0CG42 384 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CXCL12P48061 93 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NDUFAF7Q7L592 441 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ANKRD37Q7Z713 158 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 MAP6Q96JE9 813 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CACNG6Q9BXT2 260 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NMNAT2Q9BZQ4 307 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 WDFY4Q6ZS81 3184 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ANXA2P2A6NMY6 339 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NOTOA8MTQ0 251 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FADS1O60427 444 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TSPAN2O60636 221 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 KHDRBS3O75525 346 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 RENP00797 406 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TCRBP04435 133 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ANXA2P07355 339 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR2T7P0C7T2 308 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 DPP4P27487 766 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SELENOPP49908 381 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 AFF3P51826 1226 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ACTA2P62736 377 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ACTG2P63267 376 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 PAPD4Q6PIY7 484 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 D2HGDHQ8N465 521 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR2T27Q8NH04 317 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR14A16Q8NHC5 309 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 PTDSS2Q9BVG9 487 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CYSLTR2Q9NS75 346 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SPATA2Q9UM82 520 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 B9D1Q9UPM9 204 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 BAIAP2Q9UQB8 552 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NOS1APO75052 506 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 GATBO75879 557 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SKP1P63208 163 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SF3A2Q15428 464 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ELAVL1Q15717 326 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 C1orf140Q5VVS0 124 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 BPHLQ86WA6 291 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FAM219AQ8IW50 185 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CMIPQ8IY22 773 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 DAZLQ92904 295 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 YIPF5Q969M3 257 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CDX2Q99626 313 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SEC61A2Q9H9S3 476 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TAS2R10Q9NYW0 307 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR5V1Q9UGF6 321 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FOXJ3Q9UPW0 622 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 PCDHGA9Q9Y5G4 932 aaKnown RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NPFFR2Q9Y5X5 522 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CELSR3Q9NYQ7 3312 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 KDM4BO94953 1096 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FOSL2P15408 326 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 BDH1Q02338 343 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 LGALS3BPQ08380 585 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SPOCK1Q08629 439 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CBFBQ13951 182 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ACBD4Q8NC06 268 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SLC46A1Q96NT5 459 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ELOVL3Q9HB03 270 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 P2RY10O00398 339 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 RAD52P43351 418 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 GALK2Q01415 458 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 Q499Y3 187 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 DCXRQ7Z4W1 244 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NOXA1Q86UR1 476 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 GPALPP1Q8IXQ4 340 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 NPRL2Q8WTW4 380 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FAM46BQ96A09 425 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR5B2Q96R09 309 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TRAF4Q9BUZ4 470 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-206ENST00000544455 METTL7AQ9H8H3 244 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 CA10Q9NS85 328 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 HAO2Q9NYQ3 351 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ZNF69Q9UC07 566 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 ZNF281Q9Y2X9 895 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 IGHV5-10-1A0A0J9YXX1 117 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 MEN1O00255 615 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SIX6O95475 246 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 GP1BBP13224 206 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 VEGFCP49767 419 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 SERTAD2Q14140 314 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FAM198BQ6UWH4 519 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 EXD3Q8N9H8 876 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 FAM71CQ8NEG0 241 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR7G1Q8NGA0 311 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 OR11H4Q8NGC9 324 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 MGAT4AQ9UM21 535 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 V9GY05 133 aa3.39□□□□□ -1.87
BRCA2-206ENST00000544455 TRAV36DV7A0A075B6V5 113 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms