RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	CMIP	Q8IY22	773 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	EID2	Q8N6I1	236 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	OR4D10	Q8NGI6	311 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	OR4K13	Q8NH42	304 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	OR56B4	Q8NH76	319 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	NR4A3	Q92570	626 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	TEX12	Q9BXU0	123 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	SPACA6	W5XKT8	324 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	FAM74A7	A6NL05	159 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268		D6RAR5	112 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	CHST10	O43529	356 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	OR10H2	O60403	315 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	AGR2	O95994	175 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ALDOB	P05062	364 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	NAA10	P41227	235 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ACAA2	P42765	397 aa	Known RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	MAGEB1	P43366	347 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	HSD11B2	P80365	405 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	FAM74A3	Q4VXF1	159 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	TP53I3	Q53FA7	332 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	PYHIN1	Q6K0P9	492 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	MTFR2	Q6P444	385 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	TOMM5	Q8N4H5	51 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	GATS	Q8NAP1	163 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	RELT	Q969Z4	430 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	CTHRC1	Q96CG8	243 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ELMOD3	Q96FG2	381 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	KLHDC3	Q9BQ90	382 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ESRP2	Q9H6T0	727 aa	Known RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	KLHL1	Q9NR64	748 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	CMC2	Q9NRP2	79 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	PPP1R14D	Q9NXH3	145 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	MED31	Q9Y3C7	131 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	SEC16A	O15027	2179 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	FAM171A2	A8MVW0	826 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	GATC	O43716	136 aa	Known RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	RGS9	O75916	674 aa	Predicted RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	SOX30	O94993	753 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	MAOA	P21397	527 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	AVPR2	P30518	371 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	PYCR1	P32322	319 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ARL4D	P49703	201 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	RAB38	P57729	211 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF528	Q3MIS6	628 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	WDR74	Q6RFH5	385 aa	Predicted RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	NPSR1	Q6W5P4	371 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ESPNL	Q6ZVH7	1005 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF454	Q8N9F8	522 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF527	Q8NB42	609 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	MRPS24	Q96EL2	167 aa	Known RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ABHD1	Q96SE0	405 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	PRDM9	Q9NQV7	894 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	DNAJB12	Q9NXW2	375 aa	Known RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	MLX	Q9UH92	298 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	GPR160	Q9UJ42	338 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	RASD1	Q9Y272	281 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268		A0A0B4J2E0	115 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268		A0A1B0GX12	115 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	TF	P02787	698 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	HPX	P02790	462 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	NPR2	P20594	1047 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	NFYA	P23511	347 aa	Predicted RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	THBS2	P35442	1172 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	PGD	P52209	483 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ALG10B	Q5I7T1	473 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	SLC23A3	Q6PIS1	610 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	KIRREL2	Q6UWL6	708 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	BEND4	Q6ZU67	534 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	CEACAM19	Q7Z692	300 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	OR4D9	Q8NGE8	314 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	OR52E2	Q8NGJ4	325 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	SMPDL3B	Q92485	455 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	ASB6	Q9NWX5	421 aa		13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.64	□□□□□ -0.23
CHFR-223	ENST00000544268	MPDZ	O75970	2070 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	ANXA2P2	A6NMY6	339 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	POM121C	A8CG34	1229 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	C17orf51	A8MQB3	221 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	IDS	B3KWA1	339 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	TMEM150C	B9EJG8	249 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268		H3BMH7	237 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF593	O00488	134 aa	Predicted RBP	13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	GMFG	O60234	142 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	SBK2	P0C263	348 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	FOLR1	P15328	257 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	HIST1H1C	P16403	213 aa	Known RBP	13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	SLC2A5	P22732	501 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	GRPR	P30550	384 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	CCR6	P51684	374 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	ACSM1	Q08AH1	577 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	HBM	Q6B0K9	141 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	ALKAL2	Q6UX46	152 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	TMPRSS11F	Q6ZWK6	438 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	RABEPK	Q7Z6M1	372 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	GID4	Q8IVV7	300 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	SIAH3	Q8IW03	269 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	NAXD	Q8IW45	347 aa		13.63	□□□□□ -0.23
CHFR-223	ENST00000544268	PDZD9	Q8IXQ8	264 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms