RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ITGADQ13349 1161 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 P2RY6Q15077 328 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FAM122BQ7Z309 247 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 C20orf196Q8IYI0 205 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ARIH2OSQ8N7S6 290 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SYT14Q8NB59 555 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR8D4Q8NGM9 314 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF519Q8TB69 540 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RASD2Q96D21 266 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 LRR1Q96L50 414 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 C9orf16Q9BUW7 83 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OSBPL10Q9BXB5 764 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ULBP2Q9BZM5 246 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GLTPQ9NZD2 209 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KLF2Q9Y5W3 355 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 EI24O14681 340 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 LYZL6O75951 148 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TP53P04637 393 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CDH2P19022 906 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IGHV1-2P23083 117 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IGFBP5P24593 272 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 GRNP28799 593 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MYBPC1Q00872 1141 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ROR2Q01974 943 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TFF3Q07654 80 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CD47Q08722 323 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 KDM4DQ6B0I6 523 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CBR4Q8N4T8 237 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 OR2T33Q8NG76 320 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TMEM54Q969K7 222 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CRLF2Q9HC73 371 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TAS2R16Q9NYV7 291 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 RRP15Q9Y3B9 282 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ORC6Q9Y5N6 252 aa12.77□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ALPK2Q86TB3 2170 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CIB4A0PJX0 185 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 H7C1C5 153 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 BHLHE40O14503 412 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IMPA2O14732 288 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MITFO75030 526 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CLDN1O95832 211 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 NR2C1P13056 603 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IL32P24001 234 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MPGP29372 298 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 UGT2B10P36537 528 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 LCN6P62502 163 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 PPP2R2BQ00005 443 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 DAG1Q14118 895 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TRIP10Q15642 601 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TSC22D1Q15714 1073 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MESTQ5EB52 335 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 SLC35F1Q5T1Q4 408 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 STAC2Q6ZMT1 411 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 JAZF1Q86VZ6 243 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ENOPH1Q9UHY7 261 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 BAIAP2Q9UQB8 552 aa12.76□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MYO18BQ8IUG5 2567 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ARPC3O15145 178 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IDH3BO43837 385 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 RAD51DO75771 328 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TXNDC12O95881 172 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ITGA5P08648 1049 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 QDPRP09417 244 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 COX5AP20674 150 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 FOXG1P55316 489 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TGFBR3Q03167 851 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 CEACAM16Q2WEN9 425 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 SLC27A4Q6P1M0 643 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ADCK1Q86TW2 530 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 PARP8Q8N3A8 854 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 IQCF1Q8N6M8 205 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 OR4Q3Q8NH05 313 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 OR4K13Q8NH42 304 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 FNDC8Q8TC99 324 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MCHR2Q969V1 340 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 RBP7Q96R05 134 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 ALG12Q9BV10 488 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
TNFRSF1A-216ENST00000543995 MRPL13Q9BYD1 178 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms