RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TIGD6	Q17RP2	521 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ARMCX4	Q5H9R4	360 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	LRIF1	Q5T3J3	769 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MFSD12	Q6NUT3	480 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	PLXDC2	Q6UX71	529 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	GDPGP1	Q6ZNW5	385 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MSANTD1	Q6ZTZ1	278 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SPATC1	Q76KD6	591 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF551	Q7Z340	670 aa	Predicted RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ZAR1	Q86SH2	424 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	KRT73	Q86Y46	540 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	HS3ST5	Q8IZT8	346 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	FAM86B1	Q8N7N1	296 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	OR14L1P	Q8NHC6	308 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	FBXO30	Q8TB52	745 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	APH1B	Q8WW43	257 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	FAM162A	Q96A26	154 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	CIDEC	Q96AQ7	238 aa	Predicted RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MTERF3	Q96E29	417 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	LRRC46	Q96FV0	321 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	HRASLS5	Q96KN8	279 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	BBS4	Q96RK4	519 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	KLHDC3	Q9BQ90	382 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SYT3	Q9BQG1	590 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SLC30A2	Q9BRI3	323 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SLC22A4	Q9H015	551 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	PIGM	Q9H3S5	423 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	REEP4	Q9H6H4	257 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	RNF122	Q9H9V4	155 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	PRM3	Q9NNZ6	103 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MIEF1	Q9NQG6	463 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MED29	Q9NX70	200 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	PAQR5	Q9NXK6	330 aa	Predicted RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ALKBH4	Q9NXW9	302 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	MRPL39	Q9NYK5	338 aa	Known RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SLAMF8	Q9P0V8	285 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	EIF3K	Q9UBQ5	218 aa	Known RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ATP6V1H	Q9UI12	483 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	STUB1	Q9UNE7	303 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324	SAMD4A	Q9UPU9	718 aa	Known RBP	5.71	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF175	Q9Y473	711 aa		5.71	□□□□□ -1.5
CIT-213	ENST00000543324		A0A0X1KG70	313 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	IQCM	A0A1B0GVH7	501 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		A0A1W2PQD3	144 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR2M5	A3KFT3	312 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RBMY1B	A6NDE4	496 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RBMY1E	A6NEQ0	496 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	C12orf71	A8MTZ7	269 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DEFB108A	A8MXU0	73 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		C9JVG2	144 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	NPIPB9	F8W1W9	429 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		H0YC42	278 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ETV2	O00321	342 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	MSTN	O14793	375 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SCAMP2	O15127	329 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RGS14	O43566	566 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	TNFRSF21	O75509	655 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	CRCP	O75575	148 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	UTS2	O95399	124 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	HLA-DQB1	P01920	261 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	IL6	P05231	212 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RBMY1D	P0C7P1	496 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF16	P17020	682 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	HNF1A	P20823	631 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	TBXA2R	P21731	343 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	LOX	P28300	417 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	GRK5	P34947	590 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	GGT2	P36268	569 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	TGFBR1	P36897	503 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	HTR2B	P41595	481 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	KIR2DL2	P43627	348 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	STAR	P49675	285 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	CLDN20	P56880	219 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	RPL38	P63173	70 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	EEF1A1	P68104	462 aa	Known RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	SCN1B	Q07699	218 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	HSPB3	Q12988	150 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DGCR6	Q14129	220 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DUSP5	Q16690	384 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DECR1	Q16698	335 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	PLPPR5	Q32ZL2	321 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324		Q5BKY6	102 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	EEF1A1P5	Q5VTE0	462 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	NXNL2	Q5VZ03	156 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ANKRD34A	Q69YU3	496 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR5M10	Q6IEU7	315 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	OR2T5	Q6IEZ7	315 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ERICH5	Q6P6B1	374 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZCCHC12	Q6PEW1	402 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	DNM1P46	Q6ZS02	220 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	NRARP	Q7Z6K4	114 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	KIF18B	Q86Y91	864 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ZDHHC21	Q8IVQ6	265 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	MSRB3	Q8IXL7	192 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	ENTHD1	Q8IYW4	607 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	GCNT2	Q8N0V5	402 aa		5.7	□□□□□ -1.5
CIT-213	ENST00000543324	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	5.7	□□□□□ -1.5
CIT-213	ENST00000543324	NATD1	Q8N6N6	113 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms