RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 RAG2P55895 527 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 GRM7Q14831 915 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 PRICKLE4Q2TBC4 344 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 GSG1LQ6UXU4 331 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 BAIAP2L2Q6UXY1 529 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 SHISA6Q6ZSJ9 500 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 SLC35D2Q76EJ3 337 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 DPY19L4Q7Z388 723 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 CMIPQ8IY22 773 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 OR14A16Q8NHC5 309 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 TMEM106AQ96A25 262 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 DGAT2Q96PD7 388 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 SLC38A3Q99624 504 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 NPTNQ9Y639 398 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 FAM25EA8MYX2 175 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 M0QYG6 137 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 GIPP09681 153 aaPredicted RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 APEHP13798 732 aaKnown RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 AKR1C2P52895 323 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 CTXN1P60606 82 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 AKR1C1Q04828 323 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 LIN54Q6MZP7 749 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 NSMAFQ92636 917 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 MFFQ9GZY8 342 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 C12orf10Q9HB07 376 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 FARSAQ9Y285 508 aaKnown RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 A0A0J9YY10 115 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 MFSD2BA6NFX1 497 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 GALR3O60755 368 aaPredicted RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 RLN2P04090 185 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 FOXL2P58012 376 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 FHL5Q5TD97 284 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 NKAIN2Q5VXU1 208 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF626Q68DY1 528 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 RGS7BPQ6MZT1 257 aaPredicted RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF627Q7L945 461 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 CA13Q8N1Q1 262 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 SYS1Q8N2H4 156 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 LSM14AQ8ND56 463 aaKnown RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ZNF563Q8TA94 476 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 BAHD1Q8TBE0 780 aaPredicted RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 LMX1AQ8TE12 382 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ATOH1Q92858 354 aaPredicted RBP13.95□□□□□ -0.18
CNOT9-208ENST00000542068 SEC22AQ96IW7 307 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 RADILQ96JH8 1075 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 PTDSS2Q9BVG9 487 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 TRIM2Q9C040 744 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 B3GNT4Q9C0J1 378 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 HAO2Q9NYQ3 351 aa13.95□□□□□ -0.18
CNOT9-208ENST00000542068 ELOA3DA6NLF2 546 aaPredicted RBP13.94□□□□□ -0.18
CNOT9-208ENST00000542068 C11orf98E9PRG8 122 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 F5H5P2 479 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 CCSO14618 274 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 KCNJ13O60928 360 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 CBX7O95931 251 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 PLGP00747 810 aaPredicted RBP13.94□□□□□ -0.18
CNOT9-208ENST00000542068 CD3DP04234 171 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 GABRG2P18507 467 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 OR1D4P47884 311 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 ARFIP1P53367 373 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 ELOA3BQ3SY89 546 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 SCGB2B2Q4G0G5 96 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 MCATQ8IVS2 390 aaKnown RBP13.94□□□□□ -0.18
CNOT9-208ENST00000542068 DND1Q8IYX4 353 aaKnown RBP13.94□□□□□ -0.18
CNOT9-208ENST00000542068 POMGNT2Q8NAT1 580 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 RCBTB1Q8NDN9 531 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 ELOA3Q8NG57 546 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 WDR76Q9H967 626 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 PRTFDC1Q9NRG1 225 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 MED11Q9P086 117 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 KCNAB3O43448 404 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 NDUFB6O95139 128 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 ZP3P21754 424 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 TSFMP43897 325 aaKnown RBP13.94□□□□□ -0.18
CNOT9-208ENST00000542068 ARL4DP49703 201 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 PSG6Q00889 435 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 SLC22A18ASQ8N1D0 253 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 PLPP7Q8NBV4 271 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 FAM71CQ8NEG0 241 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 LHFPL5Q8TAF8 219 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 SLC2A12Q8TD20 617 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 Q9N2J8 555 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 LAMP5Q9UJQ1 280 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 PILRAQ9UKJ1 303 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 FBXO4Q9UKT5 387 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 FBXL3Q9UKT7 428 aa13.94□□□□□ -0.18
CNOT9-208ENST00000542068 C17orf51A8MQB3 221 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 CTNSO60931 367 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 MYF5P13349 255 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 PRKACAP17612 351 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 RPS4Y1P22090 263 aaKnown RBP13.93□□□□□ -0.18
CNOT9-208ENST00000542068 CCKBRP32239 447 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 DLX5P56178 289 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 GK2Q14410 553 aaPredicted RBP13.93□□□□□ -0.18
CNOT9-208ENST00000542068 ULK3Q6PHR2 472 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 SLC25A36Q96CQ1 311 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 HAVCR1Q96D42 359 aa13.93□□□□□ -0.18
CNOT9-208ENST00000542068 MOGAT1Q96PD6 335 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms