RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 TSPAN19P0C672 248 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 IFI30P13284 250 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 NQO1P15559 274 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 SRD5A1P18405 259 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 FUT1P19526 365 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 SLC9A3P48764 834 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 ACTR3P61158 418 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 LSM11P83369 360 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 BSPH1Q075Z2 132 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PUDPQ08623 228 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PMS2P3Q13401 168 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 TAB1Q15750 504 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PGGHGQ32M88 737 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 MS4A18Q3C1V0 323 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 ANKDD1AQ495B1 522 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 FGD3Q5JSP0 725 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 CYB5R2Q6BCY4 276 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 OR2T5Q6IEZ7 315 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 TBPL2Q6SJ96 375 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 DNM1P46Q6ZS02 220 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 TMPRSS11FQ6ZWK6 438 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 CREB3L2Q70SY1 520 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 HIST3H2AQ7L7L0 130 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 NUFIP2Q7Z417 695 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PXKQ7Z7A4 578 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 GALNT5Q7Z7M9 940 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 NRMQ8IXM6 262 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 LINC00471Q8N535 108 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 C10orf53Q8N6V4 93 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 OR4K5Q8NGD3 323 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 OR2T29Q8NH02 315 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 HTRA1Q92743 480 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 HIST1H2ACQ93077 130 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 RSRC1Q96IZ7 334 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 ADAD1Q96M93 576 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 TRAF4Q9BUZ4 470 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 KRCC1Q9NPI7 259 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PARPBPQ9NWS1 579 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 CISD1Q9NZ45 108 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 B3GAT1Q9P2W7 334 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 SEC14L4Q9UDX3 406 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 AURKCQ9UQB9 309 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 TMEM5Q9Y2B1 443 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 NOSIPQ9Y314 301 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 NOX1Q9Y5S8 564 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 LYVE1Q9Y5Y7 322 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 ROS1P08922 2347 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 TNFRSF11BO00300 401 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 PIP5K1CO60331 668 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 LMX1BO60663 402 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 FKBP6O75344 327 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 CST1P01037 141 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 ADORA3P0DMS8 318 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 ZNF43P17038 809 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 PSMB1P20618 241 aaKnown RBP7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 MAKP20794 623 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 CBLP22681 906 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 NTF4P34130 210 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 IFNGR2P38484 337 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 OMPP47874 163 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 OR3A2P47893 321 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 CCNIQ14094 377 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 SEC23BQ15437 767 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 STK11Q15831 433 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 TFAP2EQ6VUC0 442 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 NHLRC1Q6VVB1 395 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 NANOGNBQ7Z5D8 188 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 GPAT4Q86UL3 456 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 EPHX4Q8IUS5 362 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 C10orf67Q8IYJ2 551 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 LRRC17Q8N6Y2 441 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 ZIC4Q8N9L1 334 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 OR4C15Q8NGM1 316 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 OR52J3Q8NH60 311 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 SLCO4A1Q96BD0 722 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 CACNG6Q9BXT2 260 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 HDHD5Q9BXW7 423 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 OR10A4Q9H209 315 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 REEP1Q9H902 201 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 FAIMQ9NVQ4 179 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 ARMC1Q9NVT9 282 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 TAS2R5Q9NYW4 299 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 TMCC3Q9ULS5 477 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 RCE1Q9Y256 329 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 HIF3AQ9Y2N7 669 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 PRR14LQ5THK1 2151 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
CLSTN3-212ENST00000541770 DPRXA6NFQ7 191 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 NPIPB13A6NJU9 1138 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 OR6C65A6NJZ3 312 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 EFCAB9A8MZ26 197 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 NPIPB4C9JG80 1138 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 BLOC1S5-TXNDC5H3BN57 136 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 CDC42EP2O14613 210 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 TRAF3IP2O43734 574 aaPredicted RBP7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 AKAP8O43823 692 aaKnown RBP7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 OR10H3O60404 316 aa7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 MRPL33O75394 65 aaKnown RBP7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 DEAF1O75398 565 aaPredicted RBP7.62□□□□□ -1.19
CLSTN3-212ENST00000541770 ZNF432O94892 652 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms