RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
LTBR-208ENST00000541005 A0A096LPE4 126 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 A0A1W2PPZ6 126 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 A0A1W2PRG6 482 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 OVOL3O00110 214 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 BCL10O95999 233 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 IGHG1P01857 330 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 ITGA2P17301 1181 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 MSX2P35548 267 aaPredicted RBP11.43□□□□□ -0.58
LTBR-208ENST00000541005 ZNF133P52736 654 aaPredicted RBP11.43□□□□□ -0.58
LTBR-208ENST00000541005 MELKQ14680 651 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 PGGHGQ32M88 737 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 MTX3Q5HYI7 312 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 ARMC4Q5T2S8 1044 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 TMPRSS11FQ6ZWK6 438 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 DTX2Q86UW9 622 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 LRRC75AQ8NAA5 344 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 NOXO1Q8NFA2 376 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 MOSPD2Q8NHP6 518 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 TMEM171Q8WVE6 324 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 KATNB1Q9BVA0 655 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 MRPL13Q9BYD1 178 aaKnown RBP11.43□□□□□ -0.58
LTBR-208ENST00000541005 C1orf21Q9H246 121 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 CXorf56Q9H5V9 222 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 ACTR3BQ9P1U1 418 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
LTBR-208ENST00000541005 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
LTBR-208ENST00000541005 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 IGHV1-18A0A0C4DH31 117 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 ZNF503-AS2A6NEH8 195 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 EFCAB9A8MZ26 197 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 hCG_2039718K7EN88 272 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 F13BP05160 661 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 SOD3P08294 240 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 SAGP10523 405 aaPredicted RBP11.42□□□□□ -0.58
LTBR-208ENST00000541005 CBR1P16152 277 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 LIMS1P48059 325 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 ADAM8P78325 824 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 NRN1LQ496H8 165 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 ALG10Q5BKT4 473 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 SHEQ5VZ18 495 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 FAM205BPQ63HN1 556 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 LCN8Q6JVE9 175 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 PODNL1Q6PEZ8 512 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 LRFN4Q6PJG9 635 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 SLC22A25Q6T423 547 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 PRSS57Q6UWY2 283 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 B3GLCTQ6Y288 498 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 TRPM8Q7Z2W7 1104 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 PIAS4Q8N2W9 510 aaPredicted RBP11.42□□□□□ -0.58
LTBR-208ENST00000541005 SMAP2Q8WU79 429 aaPredicted RBP11.42□□□□□ -0.58
LTBR-208ENST00000541005 NMD3Q96D46 503 aaKnown RBP11.42□□□□□ -0.58
LTBR-208ENST00000541005 FOXB1Q99853 325 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 C1QTNF6Q9BXI9 259 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 TXNIPQ9H3M7 391 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 IL1RAPQ9NPH3 570 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 FAIMQ9NVQ4 179 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 B3GNT2Q9NY97 397 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
LTBR-208ENST00000541005 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
LTBR-208ENST00000541005 TRAV27A0A087WT01 109 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TRBV4-1A0A0J9YWV2 114 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 E7EQL1 145 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 CDC42EP2O14613 210 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ENTPD5O75356 428 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 SEC14L2O76054 403 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 CECR9P0C854 216 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 B4GALT1P15291 398 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ACADSP16219 412 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ATP6V1B2P21281 511 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ARR3P36575 388 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 GPR4P46093 362 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 PTH2RP49190 550 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 SMIM11AP58511 58 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TUBA1BP68363 451 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TUBA4AP68366 448 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 RUNX1T1Q06455 604 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 FOXD4Q12950 439 aaPredicted RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 LAPTM4AQ15012 233 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 FGD3Q5JSP0 725 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 C10orf128Q5T292 105 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ZNF544Q6NX49 715 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TBPL2Q6SJ96 375 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ZNF813Q6ZN06 617 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TUBA1AQ71U36 451 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 PIWIL3Q7Z3Z3 882 aaKnown RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 OAFQ86UD1 273 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 CDK20Q8IZL9 346 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 DEPDC4Q8N2C3 294 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 OR13C2Q8NGS9 318 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 POP5Q969H6 163 aaKnown RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 MCUR1Q96AQ8 359 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 DHRS9Q9BPW9 319 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms