RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 HSF1Q00613 529 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 FOXO1Q12778 655 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MEP1BQ16820 701 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 DGUOKQ16854 277 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 TBC1D25Q3MII6 688 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 CDONQ4KMG0 1287 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 CRTC2Q53ET0 693 aaPredicted RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ZNF684Q5T5D7 378 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 CD200R1LQ6Q8B3 271 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ARL9Q6T311 187 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC35D2Q76EJ3 337 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 OR6Q1Q8NGQ2 317 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 OR13C5Q8NGS8 318 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 DACH2Q96NX9 599 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 HDHD5Q9BXW7 423 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 PPIL3Q9H2H8 161 aaKnown RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ACOXLQ9NUZ1 547 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 LRFN1Q9P244 771 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SSR3Q9UNL2 185 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ASPMQ8IZT6 3477 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 IGHV3-15A0A0B4J1V0 119 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A1W2PRG6 482 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ARGFXA6NJG6 315 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 A6NL46 340 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC30A4O14863 429 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 NKX2-8O15522 239 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 TRAF3IP2O43734 574 aaPredicted RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC16A7O60669 478 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SNX4O95219 450 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 BMP4P12644 408 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 GTF2E2P29084 291 aaKnown RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 PLA2G5P39877 138 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 EIF1P41567 113 aaKnown RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ACTC1P68032 377 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ACTA1P68133 377 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MFSD13AQ14CX5 517 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 TOMM20Q15388 145 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 TIMM50Q3ZCQ8 353 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 JMJD6Q6NYC1 403 aaPredicted RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 LRRC69Q6ZNQ3 347 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC16A9Q7RTY1 509 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 CDC20BQ86Y33 519 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MFSD4AQ8N468 514 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2T4Q8NH00 348 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 PGLYRP3Q96LB9 341 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 NDEL1Q9GZM8 345 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 NXF2Q9GZY0 626 aaKnown RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MARCH7Q9H992 704 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 AKIP1Q9NQ31 210 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MOKQ9UQ07 419 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 ZFHX4Q86UP3 3567 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 PIEZO1Q92508 2521 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A0J9YW62 118 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A1W2PNV4 684 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 NPIPA5E9PKD4 350 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 GABRPO00591 440 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 XKRYO14609 159 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 CBR3O75828 277 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 CDRT1O95170 752 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 PRKAR1AP10644 381 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 BIDP55957 195 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 CAV3P56539 151 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 CLDN20P56880 219 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 MXD1Q05195 221 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC3A1Q07837 685 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 AIMP2Q13155 320 aaKnown RBP10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 MOGQ16653 247 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 WIPI1Q5MNZ9 446 aaPredicted RBP10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 ABHD17BQ5VST6 288 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 TMPPEQ6ZT21 453 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 TMPRSS7Q7RTY8 843 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 OR6N2Q8NGY6 317 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 MCFD2Q8NI22 146 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 THAP4Q8WY91 577 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 HSD17B8Q92506 261 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 MIB2Q96AX9 1013 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 UCN2Q96RP3 112 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 SRXN1Q9BYN0 137 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 FANCFQ9NPI8 374 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 SNTG1Q9NSN8 517 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 QPCTLQ9NXS2 382 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 CCDC59Q9P031 241 aaKnown RBP10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 MRM2Q9UI43 246 aaKnown RBP10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 KCNG2Q9UJ96 466 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 GNG8Q9UK08 70 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 NPIPA1Q9UND3 350 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 B3GALT5Q9Y2C3 310 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 FKBP7Q9Y680 259 aa10.97□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A1B0GTH9 108 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A1B0GVG6 124 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 TRDV1A0A1B0GX56 115 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms