RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TCRBV5S2A0A599 114 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 NPIPB13A6NJU9 1138 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 EFCAB9A8MZ26 197 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 NPIPB4C9JG80 1138 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 E7EQL1 145 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 PDE5AO76074 875 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 IGLV1-44P01699 117 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 SAGP10523 405 aaPredicted RBP14.72□□□□□ -0.05
CD9-209ENST00000540891 ZNF26P17031 533 aaPredicted RBP14.72□□□□□ -0.05
CD9-209ENST00000540891 GPR4P46093 362 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 CDH11P55287 796 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 MS4A2Q01362 244 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 SEC23BQ15437 767 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 ALG10Q5BKT4 473 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 CYP2R1Q6VVX0 501 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 TMPRSS11FQ6ZWK6 438 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 MYPOPQ86VE0 399 aaPredicted RBP14.72□□□□□ -0.05
CD9-209ENST00000540891 OR13C2Q8NGS9 318 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 OR51A7Q8NH64 312 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 TNFRSF13CQ96RJ3 184 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 ZNF347Q96SE7 839 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 FOXB1Q99853 325 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 C1orf21Q9H246 121 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 CISD1Q9NZ45 108 aaKnown RBP14.72□□□□□ -0.05
CD9-209ENST00000540891 ZNF224Q9NZL3 707 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 LAMP3Q9UQV4 416 aa14.72□□□□□ -0.05
CD9-209ENST00000540891 CELSR1Q9NYQ6 3014 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 SMPD2O60906 423 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 TRMUO75648 421 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 UBOX5O94941 541 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 IGKV3-15P01624 115 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 IGHG1P01857 330 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 B4GALT1P15291 398 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 ITGA2P17301 1181 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 OMPP47874 163 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 LIMS1P48059 325 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 SLC9A3P48764 834 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 DAP3P51398 398 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 ADAM8P78325 824 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 FGD3Q5JSP0 725 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 LCN8Q6JVE9 175 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 SLC22A25Q6T423 547 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 OAFQ86UD1 273 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 IGFN1Q86VF2 1251 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 LRRC75A-AS1Q8N1F1 130 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 FAM169BQ8N8A8 192 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 NOXO1Q8NFA2 376 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 OR52J3Q8NH60 311 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 SMAP2Q8WU79 429 aaPredicted RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 HDAC2Q92769 488 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 NMD3Q96D46 503 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 FAM46AQ96IP4 442 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 CLPTM1LQ96KA5 538 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 SLC38A2Q96QD8 506 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 TXNIPQ9H3M7 391 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 NOX3Q9HBY0 568 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 IL1RAPQ9NPH3 570 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 B3GNT2Q9NY97 397 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 PRPF19Q9UMS4 504 aaKnown RBP14.71□□□□□ -0.05
CD9-209ENST00000540891 POFUT2Q9Y2G5 429 aa14.71□□□□□ -0.05
CD9-209ENST00000540891 MCIDASD6RGH6 385 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ATP6V1G2-DDX39BF2Z307 99 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 OVOL3O00110 214 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 DHHO43323 396 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 IGHMP01871 453 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 FABP3P05413 133 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 CELA3BP08861 270 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 QDPRP09417 244 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 CECR9P0C854 216 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 PAX1P15863 534 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 CBR1P16152 277 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ACADSP16219 412 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 PAX7P23759 505 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ZNF133P52736 654 aaPredicted RBP14.7□□□□□ -0.06
CD9-209ENST00000540891 TRIM25Q14258 630 aaKnown RBP14.7□□□□□ -0.06
CD9-209ENST00000540891 C3orf36Q3SXR2 165 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ZNF813Q6ZN06 617 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 MDP1Q86V88 176 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 WFDC11Q8NEX6 87 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 OR4K5Q8NGD3 323 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 TMEM171Q8WVE6 324 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 MCHR2Q969V1 340 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ZNF75AQ96N20 296 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 GPA33Q99795 319 aa14.7□□□□□ -0.06
CD9-209ENST00000540891 ZNF701Q9NV72 531 aaPredicted RBP14.7□□□□□ -0.06
CD9-209ENST00000540891 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
CD9-209ENST00000540891 IGKV1D-43A0A0B4J1Z2 117 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 SH3PXD2BA1X283 911 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CENPBD1B2RD01 187 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CD8AP01732 235 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 HLA-HP01893 362 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CLRN1P58418 232 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 CTXN1P60606 82 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 RPL27P61353 136 aaKnown RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 NKX6-1P78426 367 aaPredicted RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 MYBPC1Q00872 1141 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 SPIBQ01892 262 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 NAAAQ02083 359 aa14.69□□□□□ -0.06
CD9-209ENST00000540891 TOP3AQ13472 1001 aaPredicted RBP14.69□□□□□ -0.06
CD9-209ENST00000540891 ANKDD1AQ495B1 522 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms