RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RELNP78509 3460 aa12.75□□□□□ -0.37
CYB561A3-216ENST00000540755 A0A0J9YW62 118 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 NPIPA5E9PKD4 350 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ARHGEF9O43307 516 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 SERPINI2O75830 405 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 GYPBP06028 91 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 HLA-DOBP13765 273 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 PSMB9P28065 219 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ATP6V1E1P36543 226 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 SLC16A1P53985 500 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 H3F3AP84243 136 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 HSF1Q00613 529 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 PON3Q15166 354 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 SLC35D2Q76EJ3 337 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 GGNQ86UU5 652 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ANKRD13BQ86YJ7 626 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 KDM8Q8N371 416 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 POMGNT2Q8NAT1 580 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 OR4F15Q8NGB8 312 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ASB10Q8WXI3 467 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 NMD3Q96D46 503 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 OXGR1Q96P68 337 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 NAA11Q9BSU3 229 aaPredicted RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ADGRL4Q9HBW9 690 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 ASB6Q9NWX5 421 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 CHCHD3Q9NX63 227 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 NPIPA1Q9UND3 350 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 LSM2Q9Y333 95 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 NOX1Q9Y5S8 564 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 MED12Q93074 2177 aa12.74□□□□□ -0.37
CYB561A3-216ENST00000540755 TRAV17A0A0B4J275 112 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 TMEM129A0AVI4 362 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 PRSS37A4D1T9 235 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 CYSRT1A8MQ03 144 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 FAM166BA8MTA8 275 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ACOT7O00154 380 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 MYL12BO14950 172 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 GLCEO94923 617 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 APOL3O95236 402 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 BCL10O95999 233 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 SBK2P0C263 348 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 IFNGR1P15260 489 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 POU3F2P20265 443 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 RFC3P40938 356 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 MAGEA5P43359 124 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ETV1P50549 477 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 RAC3P60763 192 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 TIGD6Q17RP2 521 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 NHLRC1Q6VVB1 395 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 B3GLCTQ6Y288 498 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 SHFQ7M4L6 423 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 FAM109AQ8N4B1 249 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 OR2T4Q8NH00 348 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 TM9SF4Q92544 642 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ZHX1-C8orf76Q96EF9 292 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 COG8Q96MW5 612 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ZNF649Q9BS31 505 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 RASD1Q9Y272 281 aa12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 TNRC6AQ8NDV7 1962 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-216ENST00000540755 ZNF814B7Z6K7 855 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 TNFSF11O14788 317 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 VAMP5O95183 116 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 LIMS3P0CW19 117 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 LIMS4P0CW20 117 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 SFTPCP11686 197 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 CLDN20P56880 219 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 PPIAP62937 165 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ACTC1P68032 377 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ACTA1P68133 377 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 C1DQ13901 141 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 MELKQ14680 651 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 POU4F3Q15319 338 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 MED22Q15528 200 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 LINC01590Q5TEZ4 76 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 GPR107Q5VW38 600 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 TMEM225Q6GV28 225 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 IGFL3Q6UXB1 125 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 GHDCQ8N2G8 530 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ACBD7Q8N6N7 88 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 C12orf43Q96C57 262 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 CNN2Q99439 309 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 SYT4Q9H2B2 425 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms