RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 A0A1W2PPW3 197 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 FAM157AC9JC47 383 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 TPST2O60704 377 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 RP2O75695 350 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 VENTXO95231 258 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 ANPEPP15144 967 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 GPX2P18283 190 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC6A2P23975 617 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 CFPP27918 469 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 COMPP49747 757 aaPredicted RBP10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 CDH12P55289 794 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 SELENOVP59797 346 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 RAB39AQ14964 217 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF613Q6PF04 617 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 LRP11Q86VZ4 500 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 CARM1Q86X55 608 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF584Q8IVC4 421 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 WDFY1Q8IWB7 410 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 SKA3Q8IX90 412 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 C10orf111Q8N326 155 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 C10orf53Q8N6V4 93 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 HIPK4Q8NE63 616 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 OR6X1Q8NH79 312 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM54Q969K7 222 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 YIPF5Q969M3 257 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 SPDL1Q96EA4 605 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 C1orf198Q9H425 327 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 GLTPQ9NZD2 209 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 VAPAQ9P0L0 249 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 SLAMF8Q9P0V8 285 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 MYEF2Q9P2K5 600 aaKnown RBP10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 DUSP13Q9UII6 198 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
CBX3P4-202ENST00000540428 IGLV3-9A0A075B6K5 115 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 TRAV20A0A0B4J274 112 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 EVPLLA8MZ36 301 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 LRRN3E7EW58 273 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 POLR3GO15318 223 aaPredicted RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 PPIHO43447 177 aaKnown RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 CHP2O43745 196 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 NCR1O76036 304 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 MFN2O95140 757 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 OR6A2O95222 327 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 TGDSO95455 350 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 ADORA3P0DMS8 318 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 BIDP55957 195 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 LMO4P61968 165 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 MYBPC1Q00872 1141 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 RUNX1T1Q06455 604 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 ZP4Q12836 540 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 MAD2L1BPQ15013 274 aaPredicted RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 PCGF3Q3KNV8 242 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 PAGE3Q5JUK9 113 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 RGS7BPQ6MZT1 257 aaPredicted RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 SHQ1Q6PI26 577 aaKnown RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 USP43Q70EL4 1123 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC35D2Q76EJ3 337 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 ARMC8Q8IUR7 673 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 FUNDC1Q8IVP5 155 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC22A24Q8N4F4 322 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF566Q969W8 418 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 ZMYND19Q96E35 227 aaPredicted RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC25A44Q96H78 314 aaPredicted RBP10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 WFDC6Q9BQY6 131 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 NARFLQ9H6Q4 476 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC52A3Q9NQ40 469 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 TCF7L2Q9NQB0 619 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 NKIRAS2Q9NYR9 191 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 TREM2Q9NZC2 230 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 FZR1Q9UM11 496 aa10.28□□□□□ -0.76
CBX3P4-202ENST00000540428 C17orf100A8MU93 164 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 WNT9BO14905 357 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 MGRN1O60291 552 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SERPINI2O75830 405 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SNAP29O95721 258 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 PNPP00491 289 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 PTHP01270 115 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 NAT2P11245 290 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF250P15622 560 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 HILS1P60008 231 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 MAGOHP61326 146 aaKnown RBP10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF74Q16587 644 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 NKPD1Q17RQ9 610 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 WDR88Q6ZMY6 472 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF519Q8TB69 540 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 FAM216AQ8WUB2 273 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 SNX33Q8WV41 574 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 C7orf26Q96N11 449 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 JMJD8Q96S16 334 aa10.27□□□□□ -0.77
CBX3P4-202ENST00000540428 MCHR1Q99705 422 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms