RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 GULP1Q9UBP9 304 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 PSG11Q9UQ72 335 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 PCDHA9Q9Y5H5 950 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 V9GYH0 126 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF27A3QJZ7 478 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF25A6NGN4 478 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF26H0Y7S4 382 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF4O60810 478 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 HPP00738 406 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 SERPINA3P01011 423 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 CCL2P13500 99 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF9Q5VWM5 478 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 ZNF573Q86YE8 665 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 SERPINA12Q8IW75 414 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 BAP18Q8IXM2 172 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 OR13D1Q8NGV5 346 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PROKR1Q8TCW9 393 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 TCTN2Q96GX1 697 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 STOX2Q9P2F5 926 aaPredicted RBP11.52□□□□□ -0.57
DDX55-206ENST00000539934 CCL27Q9Y4X3 112 aa11.52□□□□□ -0.57
DDX55-206ENST00000539934 A0A1B0GV72 72 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 LRIT2A6NDA9 550 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 GPR31O00270 319 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 KLF8O95600 359 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 PDYNP01213 254 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 FASP25445 335 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 STOMP27105 288 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 CD82P27701 267 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 NTSR1P30989 418 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 MAP2K3P46734 347 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 MRPS10P82664 201 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 CDK6Q00534 326 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 IRF8Q02556 426 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 CHRNB3Q05901 458 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 HNRNPA0Q13151 305 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 SLC10A1Q14973 349 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 SAMD4BQ5PRF9 694 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 ZNF620Q6ZNG0 422 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 TMPRSS7Q7RTY8 843 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 PIP4P1Q86T03 277 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 SYT12Q8IV01 421 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 ZNF547Q8IVP9 402 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 OR2M7Q8NG81 312 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 FAM222BQ8WU58 562 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 CACNG8Q8WXS5 425 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 LINC00615Q96LM1 132 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 URM1Q9BTM9 101 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 THUMPD3Q9BV44 507 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 TMEM38AQ9H6F2 299 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 LRTM1Q9HBL6 345 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 RBFOX1Q9NWB1 397 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 TMEM218A2RU14 115 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 EI24O14681 340 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 NME2P1O60361 137 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 C1orf105O95561 183 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 SLC16A8O95907 504 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 NME1P15531 152 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 HNRNPA2B1P22626 353 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 IMPA1P29218 277 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 KHKP50053 298 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 RPS14P62263 151 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 CDK3Q00526 305 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 HLXQ14774 488 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 ZNF658BQ4V348 819 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 SAXO2Q658L1 398 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 C8orf82Q6P1X6 216 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 MMP21Q8N119 569 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 OR2G2Q8NGZ5 317 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 ERGIC1Q969X5 290 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 COQ8BQ96D53 544 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 FAM120BQ96EK7 910 aaKnown RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 COX14Q96I36 57 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 FUZQ9BT04 418 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 SLITRK2Q9H156 845 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 DPEP2Q9H4A9 486 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 ZBTB20Q9HC78 741 aaPredicted RBP11.51□□□□□ -0.57
DDX55-206ENST00000539934 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 TMEM45AQ9NWC5 275 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 C1orf109Q9NX04 203 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 CLCA2Q9UQC9 943 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 SLC35A3Q9Y2D2 325 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 HECTD1Q9ULT8 2610 aa11.51□□□□□ -0.57
DDX55-206ENST00000539934 TRBV11-1A0A0K0K1C0 115 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PRORSD1PA6NEY8 169 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TGOLN2O43493 480 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 EEDO75530 441 aaKnown RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 HLA-DQB1P01920 261 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 FAM157BP0CG42 384 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 HOXB2P14652 356 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PPP3CBP16298 524 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms