RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PDSS1Q5T2R2 415 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ARL9Q6T311 187 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 Q6ZTK2 550 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ERN2Q76MJ5 926 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 LINGO2Q7L985 606 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SHFQ7M4L6 423 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SLC36A1Q7Z2H8 476 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GDF7Q7Z4P5 450 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 DCUN1D3Q8IWE4 304 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CFAP206Q8IYR0 622 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CDK20Q8IZL9 346 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SLC22A18ASQ8N1D0 253 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SIRT6Q8N6T7 355 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 POMGNT2Q8NAT1 580 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 DNAAF1Q8NEP3 725 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR51G2Q8NGK0 314 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR2A12Q8NGT7 310 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR2T27Q8NH04 317 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR2L2Q8NH16 312 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 IFI44Q8TCB0 444 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 THAP4Q8WY91 577 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CNOT9Q92600 299 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GHSRQ92847 366 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 FBXW5Q969U6 566 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SMIM19Q96E16 107 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 S100A16Q96FQ6 103 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 LIN37Q96GY3 246 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 FAM46AQ96IP4 442 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SAMD8Q96LT4 415 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 F2RL3Q96RI0 385 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 BBS4Q96RK4 519 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CCNL2Q96S94 520 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CD180Q99467 661 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 DDOQ99489 341 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 MCHR1Q99705 422 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 NPAS1Q99742 590 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ACTRT3Q9BYD9 372 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GSDMCQ9BYG8 508 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SEMA4CQ9C0C4 833 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CACYBPQ9HB71 228 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 LHX9Q9NQ69 397 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SERTAD3Q9UJW9 196 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF223Q9UK11 482 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PPIEQ9UNP9 301 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SLC6A5Q9Y345 797 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CHST2Q9Y4C5 530 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SPTAN1Q13813 2472 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CCDC187A0A096LP49 1063 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF98A6NK75 572 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SLC31A1O15431 190 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 NDUFS4O43181 175 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 DNAJB6O75190 326 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 KHDRBS3O75525 346 aaKnown RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CDC123O75794 336 aaPredicted RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 IFNGP01579 166 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 LPLP06858 475 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 DPP4P27487 766 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 TEAD1P28347 426 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 MPIP34949 423 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 METAP1P53582 386 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 OR10A3P58181 314 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SIRPAP78324 504 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 MAT1AQ00266 395 aaKnown RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF85Q03923 595 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 FGL1Q08830 312 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 FUT5Q11128 374 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 HSPB3Q12988 150 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 DUSP8Q13202 625 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 LY6DQ14210 128 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 FZD2Q14332 565 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 INSL4Q14641 139 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SLC9A5Q14940 896 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 TOMM20Q15388 145 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 NR0B2Q15466 257 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SLC25A35Q3KQZ1 300 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 PLBD1Q6P4A8 553 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 GSG1LQ6UXU4 331 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CFAP77Q6ZQR2 320 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 Q6ZSR6 202 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 MOB3CQ70IA8 216 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CHMP1BQ7LBR1 199 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 NRMQ8IXM6 262 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CMTM4Q8IZR5 234 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 TMEM99Q8N816 258 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 OR1S1Q8NH92 325 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 THRSPQ92748 146 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 RIT1Q92963 219 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 RAB7BQ96AH8 199 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 EXOSC8Q96B26 276 aaKnown RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 HAVCR1Q96D42 359 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 MRPS24Q96EL2 167 aaKnown RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 DTD2Q96FN9 168 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ZFP3Q96NJ6 502 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SLC38A3Q99624 504 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 DPH7Q9BTV6 452 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SLC19A3Q9BZV2 496 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 OR52A5Q9H2C5 316 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms