RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMEM179BQ7Z7N9 219 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 CDK20Q8IZL9 346 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 SYT14Q8NB59 555 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 C1orf162Q8NEQ5 155 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-206ENST00000539417 OR6N1Q8NGY5 312 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 SLC25A44Q96H78 314 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-206ENST00000539417 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
RPAIN-206ENST00000539417 LRR1Q96L50 414 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 MRPL13Q9BYD1 178 aaKnown RBP13.79□□□□□ -0.2
RPAIN-206ENST00000539417 TXNIPQ9H3M7 391 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 GLTPQ9NZD2 209 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 TMEM5Q9Y2B1 443 aa13.79□□□□□ -0.2
RPAIN-206ENST00000539417 ERICH4A6NGS2 130 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 OR6C65A6NJZ3 312 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 IMPA2O14732 288 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 OR10H3O60404 316 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ACADSP16219 412 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 RASSF2P50749 326 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ZNF83P51522 516 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 SMIM11AP58511 58 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 DBPQ10586 325 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ZSCAN26Q16670 478 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 HIST3H3Q16695 136 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 FBXW10Q5XX13 1052 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 OR2T5Q6IEZ7 315 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 OR7E24Q6IFN5 339 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 OR2T29Q8NH02 315 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ZNF519Q8TB69 540 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ZNF566Q969W8 418 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 BOD1Q96IK1 185 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ADAD1Q96M93 576 aaKnown RBP13.78□□□□□ -0.2
RPAIN-206ENST00000539417 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 MAST4O15021 2626 aa13.78□□□□□ -0.2
RPAIN-206ENST00000539417 UNC119BA6NIH7 251 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 H7C1C5 153 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 STAMBPO95630 424 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 IGHMP01871 453 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 GSSP48637 474 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 RPL27P61353 136 aaKnown RBP13.77□□□□□ -0.21
RPAIN-206ENST00000539417 LCN6P62502 163 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 FMODQ06828 376 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 SPOCK1Q08629 439 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 CCNIQ14094 377 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 BEX5Q5H9J7 111 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 NCMAPQ5T1S8 102 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 C1orf94Q6P1W5 598 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 CCDC121Q6ZUS5 278 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 ABHD12BQ7Z5M8 362 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-206ENST00000539417 NOXO1Q8NFA2 376 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-206ENST00000539417 NMD3Q96D46 503 aaKnown RBP13.77□□□□□ -0.21
RPAIN-206ENST00000539417 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 Q96M85 177 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 SEC61A2Q9H9S3 476 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 NOX3Q9HBY0 568 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 TMCC3Q9ULS5 477 aa13.77□□□□□ -0.21
RPAIN-206ENST00000539417 ZNF99A8MXY4 864 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 FKBP6O75344 327 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 KRT36O76013 467 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 SLC2A10O95528 541 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 GASTP01350 101 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 IGFBP1P08833 259 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 QDPRP09417 244 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 B4GALT1P15291 398 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 ACVR1BP36896 505 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 DAP3P51398 398 aaKnown RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 TGFBR3Q03167 851 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 ANKRD16Q6P6B7 361 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 KLHL24Q6TFL4 600 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 FAM122BQ7Z309 247 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 P2RY8Q86VZ1 359 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 C17orf78Q8N4C9 275 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 PAPD5Q8NDF8 572 aaKnown RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 FGFBP3Q8TAT2 258 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 MCHR2Q969V1 340 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 RASD2Q96D21 266 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 ZNF224Q9NZL3 707 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
RPAIN-206ENST00000539417 AKAP6Q13023 2319 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
RPAIN-206ENST00000539417 NPIPB13A6NJU9 1138 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 NPIPB4C9JG80 1138 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 CST1P01037 141 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 IGHG1P01857 330 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 FPR3P25089 353 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 RPL4P36578 427 aaKnown RBP13.75□□□□□ -0.21
RPAIN-206ENST00000539417 CLRN1P58418 232 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 MESTQ5EB52 335 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 GNPDA2Q8TDQ7 276 aa13.75□□□□□ -0.21
RPAIN-206ENST00000539417 USB1Q9BQ65 265 aaKnown RBP13.75□□□□□ -0.21
RPAIN-206ENST00000539417 EGLN3Q9H6Z9 239 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms