RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PABPC4LP0CB38 370 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RBMY1CP0DJD4 496 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CCL2P13500 99 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ETS2P15036 469 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 HTR1DP28221 377 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 GDI1P31150 447 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 S100A5P33763 92 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RDXP35241 583 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RPL13AP40429 203 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 GPR4P46093 362 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ALDH3B2P48448 385 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CCNHP51946 323 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ATP12AP54707 1039 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 WDR43Q15061 677 aaKnown RBP eCLIP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IMMTQ16891 758 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 XKR7Q5GH72 579 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MS4A13Q5J8X5 152 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NHLRC3Q5JS37 347 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CLEC12AQ5QGZ9 265 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LY6G6FQ5SQ64 297 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C1orf146Q5VVC0 180 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SPINK14Q6IE38 97 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FAM199XQ6PEV8 388 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SNX31Q8N9S9 440 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NPBQ8NG41 125 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR2L3Q8NG85 312 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR2AP1Q8NGE2 309 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PNPT1Q8TCS8 783 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FBXO32Q969P5 355 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NRBF2Q96F24 287 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DUS3LQ96G46 650 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF597Q96LX8 424 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CYP2S1Q96SQ9 504 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RIOK1Q9BRS2 568 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CALN1Q9BXU9 219 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MRPL47Q9HD33 250 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SLCO1B3Q9NPD5 702 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SLC17A5Q9NRA2 495 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PAK1IP1Q9NWT1 392 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IL36GQ9NZH8 169 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CTSFQ9UBX1 484 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NUP50Q9UKX7 468 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C15orf41Q9Y2V0 281 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CDH10Q9Y6N8 788 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 POLR1AO95602 1720 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LAMC1P11047 1609 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DCAF1Q9Y4B6 1507 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NPHP4O75161 1426 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NOS1P29475 1434 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CDHR2Q9BYE9 1310 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MYH2Q9UKX2 1941 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TCOF1Q13428 1488 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ABCA3Q99758 1704 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PLEKHG1Q9ULL1 1385 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV1OR15-1A0A075B7D0 117 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV1OR21-1A0A087WYE8 117 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 HELTA6NFD8 242 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LRRIQ4A6NIV6 560 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SAGE2PA6NJ88 616 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 WWP2O00308 870 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FCN1O00602 326 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DNAJB6O75190 326 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR7A10O76100 309 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM50AO95807 157 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 HPRT1P00492 218 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV2-5P01817 119 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ANXA8P13928 327 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LONP1P36776 959 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 P2RY4P51582 365 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ATP1B3P54709 279 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 EMP2P54851 167 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ERVS71-1P61550 626 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DHODHQ02127 395 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF154Q13106 437 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LINC00303Q3SY05 128 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C14orf28Q4W4Y0 310 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 BEND6Q5SZJ8 279 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 AGBL2Q5U5Z8 902 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ANXA8L1Q5VT79 327 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FAM104BQ5XKR9 115 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FAM173BQ6P4H8 233 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MBOAT1Q6ZNC8 495 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FAM19A1Q7Z5A9 133 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF589Q86UQ0 364 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PLA2G4DQ86XP0 818 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IQCKQ8N0W5 287 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ALLCQ8N6M5 410 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FAM86B1Q8N7N1 296 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF321PQ8N8H1 164 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 BBS1Q8NFJ9 593 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR52B6Q8NGF0 335 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 AKR7LQ8NHP1 331 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZFAND1Q8TCF1 268 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 AGAP11Q8TF27 550 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SETD7Q8WTS6 366 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ART4Q93070 314 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CELF6Q96J87 481 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C12orf66Q96MD2 445 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PRAP1Q96NZ9 151 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 VGLL1Q99990 258 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms