RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 BCAS1O75363 584 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GCM2O75603 506 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SEC14L2O76054 403 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 LGI1O95970 557 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 IGHG3P01860 377 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 IFNW1P05000 195 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 HPNP05981 417 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TFPIP10646 304 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 PNMTP11086 282 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 PRG2P13727 222 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ITGA2P17301 1181 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 CHMP24386 653 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 EEF1B2P24534 225 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 CXCR1P25024 350 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 FKBP2P26885 142 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 MST1P26927 711 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TACR3P29371 465 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SFTPDP35247 375 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 APOBEC1P41238 236 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ACAA2P42765 397 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SLC1A3P43003 542 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 OR1E2P47887 323 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SERPINB10P48595 397 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ALDH3A2P51648 485 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 POLR2HP52434 150 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TPD52P55327 224 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 LOXL3P58215 753 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TAS2R41P59536 307 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SELENOWP63302 87 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 HSF1Q00613 529 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SRYQ05066 204 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 FOXF1Q12946 379 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SELENBP1Q13228 472 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SF3B4Q15427 424 aaKnown RBP eCLIP3.86□□□□□ -1.794e-47■■■■■ 46.5
SNHG1-208ENST00000538266 DUSP7Q16829 419 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ANKDD1AQ495B1 522 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GLYR1Q49A26 553 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 FAM98BQ52LJ0 330 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 IFI44LQ53G44 452 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ALG10BQ5I7T1 473 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 FGD3Q5JSP0 725 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TTC23Q5W5X9 447 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF324BQ6AW86 544 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 C3orf33Q6P1S2 294 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF613Q6PF04 617 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ULK3Q6PHR2 472 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 LINC00299Q6ZSB3 139 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TRILQ7L0X0 811 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GRINAQ7Z429 371 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 CYP4Z1Q86W10 505 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GRAMD2AQ8IUY3 354 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SIAH3Q8IW03 269 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 PM20D2Q8IYS1 436 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 UBQLNLQ8IYU4 475 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GTPBP8Q8N3Z3 284 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SVOPLQ8N434 492 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ST6GALNAC3Q8NDV1 305 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ZNF555Q8NEP9 628 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ATP6V1C2Q8NEY4 427 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 OR6T1Q8NGN1 323 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 OR5M1Q8NGP8 315 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 OR10Q1Q8NGQ4 319 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GPR119Q8TDV5 335 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 DNAJA4Q8WW22 397 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 S100ZQ8WXG8 99 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SMPDL3BQ92485 455 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 HDAC2Q92769 488 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 NTNG2Q96CW9 530 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ARSGQ96EG1 525 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 MCHR1Q99705 422 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 BARD1Q99728 777 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TRIM2Q9C040 744 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM185BQ9H7F4 350 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 GORASP2Q9H8Y8 452 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TMEM27Q9HBJ8 222 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 TIGARQ9NQ88 270 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ACER3Q9NUN7 267 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 DCAF13Q9NV06 445 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ALKBH4Q9NXW9 302 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 CHRNA9Q9UGM1 479 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 DAPK2Q9UIK4 370 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 RALYQ9UKM9 306 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 NDRG4Q9ULP0 352 aaKnown RBP3.86□□□□□ -1.79
SNHG1-208ENST00000538266 ERGIC3Q9Y282 383 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 NTNG1Q9Y2I2 539 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 SNX5Q9Y5X3 404 aa3.86□□□□□ -1.79
SNHG1-208ENST00000538266 DMXL2Q8TDJ6 3036 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 EPG5Q9HCE0 2579 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 A0A1B0GVC2 190 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 A0A1B0GWA3 101 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 OR2M5A3KFT3 312 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 TRAPPC13A5PLN9 417 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 CPSF4LA6NMK7 179 aaKnown RBP3.85□□□□□ -1.79
SNHG1-208ENST00000538266 B4DXG7 233 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 CLDN25C9JDP6 229 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 J3QRK9 145 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 hCG_2039718K7EN88 272 aa3.85□□□□□ -1.79
SNHG1-208ENST00000538266 SLC22A1O15245 554 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms