RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PRR22Q8IZ63 422 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF843Q8N446 348 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 TEX29Q8N6K0 151 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CLDN22Q8N7P3 220 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SIMC1Q8NDZ2 872 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CCDC54Q8NEL0 328 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 GRPEL2Q8TAA5 225 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 OSTF1Q92882 214 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 RAB8BQ92930 207 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 APH1AQ96BI3 265 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SLC38A2Q96QD8 506 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 INPP5KQ9BT40 448 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 LINC00470Q9BZP3 86 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 DEFB127Q9H1M4 99 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SLC6A15Q9H2J7 730 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 Q9H521 79 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ASF1BQ9NVP2 202 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 IL19Q9UHD0 177 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MKLN1Q9UL63 735 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 USP22Q9UPT9 525 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MEMO1Q9Y316 297 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF587BE7ETH6 402 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 H3BSA7 217 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 KPNA4O00629 521 aaPredicted RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 KLF4O43474 513 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MFN2O95140 757 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CBX6O95503 412 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 PDGFAP04085 211 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CLPSP04118 112 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 YES1P07947 543 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 IL12AP29459 219 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CRABP1P29762 137 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ACAA2P42765 397 aaKnown RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 EIF1AXP47813 144 aaKnown RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 UBE2NP61088 152 aaKnown RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SLC34A1Q06495 639 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ZP4Q12836 540 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 UBAP2LQ14157 1087 aaKnown RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 PON3Q15166 354 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SEC23BQ15437 767 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ETFDHQ16134 617 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 FBXL19-AS1Q494R0 122 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 Q5PR19 223 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MEDAGQ5VYS4 303 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ETV3LQ6ZN32 361 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF836Q6ZNA1 936 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 GDPD3Q7L5L3 318 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MAVSQ7Z434 540 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 OR5J2Q8NH18 312 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 CHAC2Q8WUX2 184 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 EDARADDQ8WWZ3 215 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SLC41A3Q96GZ6 507 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SH3YL1Q96HL8 342 aaPredicted RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 LRR1Q96L50 414 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 RDH12Q96NR8 316 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SIGLEC12Q96PQ1 595 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 OR5B2Q96R09 309 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 TRIB1Q96RU8 372 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 C20orf27Q9GZN8 174 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 SLC22A4Q9H015 551 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 UBQLN3Q9H347 655 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 TNFRSF12AQ9NP84 129 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 NANSQ9NR45 359 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 DNAJB12Q9NXW2 375 aaKnown RBP3.22□□□□□ -1.89
PTPN22-211ENST00000538253 MED11Q9P086 117 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 VAPAQ9P0L0 249 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 ICAM5Q9UMF0 924 aa3.22□□□□□ -1.89
PTPN22-211ENST00000538253 A0A087WUJ7 227 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 DHRS12A0PJE2 317 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 EFCAB10A6NFE3 127 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 LRRC3CA6NJW4 275 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 EFCAB9A8MZ26 197 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 H3BML4 177 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SS18L1O75177 396 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 MED6O75586 246 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 BCL10O95999 233 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ADAP00813 363 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 IGHG1P01857 330 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SMIM18P0DKX4 95 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RAB3AP20336 220 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 NPR2P20594 1047 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TACR3P29371 465 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 MAGEA5P43359 124 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CDC34P49427 236 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CLDN15P56746 228 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RAB4BP61018 213 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF117Q03924 483 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CRYZQ08257 329 aaKnown RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 RASGEF1BQ0VAM2 473 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 CDK10Q15131 360 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 OR1Q1Q15612 314 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 NNATQ16517 81 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 SYPL1Q16563 259 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM176BQ3YBM2 270 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ACSF3Q4G176 576 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-211ENST00000538253 YIF1BQ5BJH7 314 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 ZMAT1Q5H9K5 638 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 PAGE3Q5JUK9 113 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 C1QL3Q5VWW1 255 aa3.21□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM65Q6PI78 240 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms