RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PLCE1Q9P212 2302 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 NPIPB13A6NJU9 1138 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 NPIPB4C9JG80 1138 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 ENTPD5O75356 428 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 CCNB2O95067 398 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 SOX14O95416 240 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 SLC2A10O95528 541 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 CDH2P19022 906 aaPredicted RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 IFNA8P32881 189 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 KIR2DL3P43628 341 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 ARF1P84077 181 aaKnown RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 TSPAN31Q12999 210 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 ATP6AP1Q15904 470 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 MICAQ29983 383 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 STK32CQ86UX6 486 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 SYT14Q8NB59 555 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 OR4Q3Q8NH05 313 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 NRGNQ92686 78 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 KISS1RQ969F8 398 aaPredicted RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 GTPBP3Q969Y2 492 aaKnown RBP11.47□□□□□ -0.57
CHFR-216ENST00000538235 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 TXNIPQ9H3M7 391 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 CRLF2Q9HC73 371 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 NRIP3Q9NQ35 241 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 TAS2R16Q9NYV7 291 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 DNAJB9Q9UBS3 223 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 UGT2A1Q9Y4X1 527 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 RTTNQ86VV8 2226 aa11.47□□□□□ -0.57
CHFR-216ENST00000538235 AKAP9Q99996 3911 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 TEX13CA0A0J9YWL9 993 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 TUBAL3A6NHL2 446 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 DCTN6O00399 190 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 SLC43A1O75387 559 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 KRT36O76013 467 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 OR6A2O95222 327 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 CNOT4O95628 575 aaKnown RBP11.46□□□□□ -0.57
CHFR-216ENST00000538235 PLAUP00749 431 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 HRGP04196 525 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 HIST1H2ABP04908 130 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 SCG5P05408 212 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 CD14P08571 375 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 MPGP29372 298 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 ZNF133P52736 654 aaPredicted RBP11.46□□□□□ -0.57
CHFR-216ENST00000538235 SMIM11AP58511 58 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 RPL27P61353 136 aaKnown RBP11.46□□□□□ -0.57
CHFR-216ENST00000538235 SPOCK1Q08629 439 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 P2RY6Q15077 328 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 ETFDHQ16134 617 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 HIST3H2AQ7L7L0 130 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 HIST1H2ACQ93077 130 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 MUS81Q96NY9 551 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 FEVQ99581 238 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 PKP2Q99959 881 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 DGCR6LQ9BY27 220 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 POLDIP3Q9BY77 421 aaKnown RBP11.46□□□□□ -0.57
CHFR-216ENST00000538235 PARPBPQ9NWS1 579 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 GLTPQ9NZD2 209 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 GPR52Q9Y2T5 361 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.57
CHFR-216ENST00000538235 A0A096LPE4 126 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 A0A1W2PPZ6 126 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 HTR3EA5X5Y0 456 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 OR5H1A6NKK0 313 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 BHLHE40O14503 412 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 MITFO75030 526 aaPredicted RBP11.45□□□□□ -0.58
CHFR-216ENST00000538235 CIB2O75838 187 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 NDUFB2O95178 105 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 STAMBPO95630 424 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 BCL10O95999 233 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 EPXP11678 715 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 B4GALT1P15291 398 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 ACADSP16219 412 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 CRYGSP22914 178 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 ACVR1BP36896 505 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 CSNK1A1P48729 337 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 STK11Q15831 433 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 CLEC12AQ5QGZ9 265 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
CHFR-216ENST00000538235 SLC25A47Q6Q0C1 308 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 SMARCD3Q6STE5 483 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 KLHL24Q6TFL4 600 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 WFDC8Q8IUA0 241 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 IQCF1Q8N6M8 205 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 OR52N5Q8NH56 324 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 GNPDA2Q8TDQ7 276 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 GIPC3Q8TF64 312 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 NABP1Q96AH0 204 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
CHFR-216ENST00000538235 FOXN4Q96NZ1 517 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 FN3KQ9H479 309 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 SLC17A5Q9NRA2 495 aa11.45□□□□□ -0.58
CHFR-216ENST00000538235 PDP1Q9P0J1 537 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms