RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 NEURL3Q96EH8 262 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 SLC30A2Q9BRI3 323 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 SLC35A5Q9BS91 424 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 EGFL7Q9UHF1 273 aa9.41□□□□□ -0.9
CLPB-208ENST00000538021 PRSS51A0A1B0GVH4 220 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 SRRM5B3KS81 715 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 G3V4G9 280 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 TRIM13O60858 407 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 UBOX5O94941 541 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 IGHV1-46P01743 117 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 ABHD2P08910 425 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 HLA-DOBP13765 273 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 GRPRP30550 384 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 CASQ1P31415 396 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 EGR4Q05215 589 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 FAM209AQ5JX71 171 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 ZNF836Q6ZNA1 936 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 H1FNTQ75WM6 255 aaPredicted RBP9.4□□□□□ -0.9
CLPB-208ENST00000538021 ZNF627Q7L945 461 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 SKA3Q8IX90 412 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 KLHL36Q8N4N3 616 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 VPS37AQ8NEZ2 397 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 OR52P1PQ8NH57 321 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 PNPT1Q8TCS8 783 aaKnown RBP9.4□□□□□ -0.9
CLPB-208ENST00000538021 LRR1Q96L50 414 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 EGLN1Q9GZT9 426 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 RNF121Q9H920 327 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 MARCH7Q9H992 704 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 OR5V1Q9UGF6 321 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 NPTNQ9Y639 398 aa9.4□□□□□ -0.9
CLPB-208ENST00000538021 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PLSCR5A0PG75 271 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 ZNF726A6NNF4 738 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 COPEO14579 308 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 SERPINI2O75830 405 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 NDUFA7O95182 113 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 NQO1P15559 274 aaKnown RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 ECHS1P30084 290 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 CD80P33681 288 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 CRHR1P34998 444 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 RBMXP38159 391 aaKnown RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 SLC6A9P48067 706 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 UCP2P55851 309 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PAX8Q06710 450 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PMS2P3Q13401 168 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PCLAFQ15004 111 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PDCD1Q15116 288 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 FAM189A2Q15884 450 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 TBC1D28Q2M2D7 210 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 ANXA8L1Q5VT79 327 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 ZNF572Q7Z3I7 529 aaPredicted RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 SERPINA11Q86U17 422 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 CLIP4Q8N3C7 705 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 CPEB3Q8NE35 698 aaKnown RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 OR8J2Q8NGG1 315 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 OR1J1Q8NGS3 322 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 GEMIN6Q8WXD5 167 aaKnown RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 TAAR8Q969N4 342 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 TXNDC15Q96J42 360 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 MECRQ9BV79 373 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 RSPO3Q9BXY4 272 aaPredicted RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 CHIAQ9BZP6 476 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 BCL2L14Q9BZR8 327 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 PATZ1Q9HBE1 687 aaKnown RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 TCF7L1Q9HCS4 588 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 DCAF16Q9NXF7 216 aa9.39□□□□□ -0.91
CLPB-208ENST00000538021 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
CLPB-208ENST00000538021 DNAH9Q9NYC9 4486 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 MS4A18H0YCH9 400 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 RIPK2O43353 540 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 OR2T1O43869 369 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 ERLIN1O75477 346 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 HPRP00739 348 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 PLATP00750 562 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 IGHV3-13P01766 116 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 IGHV2-70P01814 119 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 CCNOP22674 350 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 ARRB2P32121 409 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 CSNK1A1P48729 337 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 ANXA11P50995 505 aaKnown RBP9.38□□□□□ -0.91
CLPB-208ENST00000538021 HOXC5Q00444 222 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 MAD2L1Q13257 205 aaPredicted RBP9.38□□□□□ -0.91
CLPB-208ENST00000538021 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 MS4A18Q3C1V0 323 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 FAM69AQ5T7M9 428 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 BRD3OSQ6XYD6 125 aa9.38□□□□□ -0.91
CLPB-208ENST00000538021 PIWIL3Q7Z3Z3 882 aaKnown RBP9.38□□□□□ -0.91
CLPB-208ENST00000538021 SLC22A24Q8N4F4 322 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms